PPP1R12C (protein phosphatase 1 regulatory subunit 12C) - Rat Genome Database

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Gene: PPP1R12C (protein phosphatase 1 regulatory subunit 12C) Chlorocebus sabaeus
Analyze
Symbol: PPP1R12C
Name: protein phosphatase 1 regulatory subunit 12C
RGD ID: 18374015
Description: ENCODES a protein that exhibits enzyme inhibitor activity (inferred); phosphatase regulator activity (inferred); protein kinase binding (inferred); INVOLVED IN signal transduction (inferred); FOUND IN cytoplasm (inferred); stress fiber (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1647,682,881 - 47,709,542 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666045237,777 - 265,422 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
stress fiber  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
PPP1R12C
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1647,682,881 - 47,709,542 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666045237,777 - 265,422 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
PPP1R12C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381955,090,918 - 55,117,637 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1955,090,914 - 55,117,637 (-)EnsemblGRCh38hg38GRCh38
GRCh371955,602,286 - 55,629,005 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361960,294,093 - 60,320,739 (-)NCBINCBI36Build 36hg18NCBI36
Build 341960,294,094 - 60,320,739NCBI
Celera1952,642,307 - 52,667,863 (-)NCBICelera
Cytogenetic Map19q13.42NCBI
HuRef1951,925,824 - 51,951,575 (-)NCBIHuRef
CHM1_11955,595,813 - 55,622,571 (-)NCBICHM1_1
T2T-CHM13v2.01958,185,408 - 58,211,313 (-)NCBIT2T-CHM13v2.0
Ppp1r12c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3974,484,518 - 4,506,762 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl74,484,519 - 4,504,679 (-)EnsemblGRCm39 Ensembl
GRCm3874,481,519 - 4,503,763 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl74,481,520 - 4,501,680 (-)EnsemblGRCm38mm10GRCm38
MGSCv3774,433,123 - 4,453,282 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3674,084,604 - 4,105,146 (-)NCBIMGSCv36mm8
Celera74,226,032 - 4,246,189 (-)NCBICelera
Cytogenetic Map7A1NCBI
cM Map72.59NCBI
Ppp1r12c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8178,362,900 - 78,385,873 (+)NCBIGRCr8
mRatBN7.2169,320,240 - 69,343,200 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl169,320,255 - 69,343,200 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx174,679,174 - 74,702,119 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0183,243,487 - 83,266,434 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0176,393,131 - 76,416,064 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0172,903,139 - 72,926,108 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl172,903,257 - 72,926,108 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0175,625,471 - 75,648,554 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4168,048,782 - 68,071,624 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera167,784,971 - 67,807,894 (-)NCBICelera
Cytogenetic Map1q12NCBI
Ppp1r12c
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555671,058,691 - 1,072,066 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555671,058,676 - 1,072,555 (+)NCBIChiLan1.0ChiLan1.0
PPP1R12C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22061,223,556 - 61,253,204 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11962,952,974 - 62,982,300 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01952,129,038 - 52,158,078 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11960,822,882 - 60,846,106 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1960,822,882 - 60,846,795 (-)Ensemblpanpan1.1panPan2
PPP1R12C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11102,495,222 - 102,522,113 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1102,495,237 - 102,522,961 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1102,552,294 - 102,577,629 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01103,148,814 - 103,174,148 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1103,148,637 - 103,169,594 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11102,785,728 - 102,811,059 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01102,497,274 - 102,522,611 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01103,261,356 - 103,286,927 (+)NCBIUU_Cfam_GSD_1.0
Ppp1r12c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244093492,141,685 - 2,156,024 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936886403,759 - 417,504 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936886403,202 - 417,602 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PPP1R12C
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl659,325,535 - 59,347,175 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1659,325,532 - 59,347,177 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2654,318,804 - 54,340,457 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Ppp1r12c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248322,105,091 - 2,121,830 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248322,104,999 - 2,122,327 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PPP1R12C
759 total Variants

Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_007998114   ⟹   XP_007996305
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1647,682,881 - 47,709,542 (-)NCBI
Vero_WHO_p1.0NW_023666045237,777 - 265,418 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038006351   ⟹   XP_037862279
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666045237,777 - 265,421 (-)NCBI
RefSeq Acc Id: XM_038006352   ⟹   XP_037862280
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666045237,777 - 265,421 (-)NCBI
RefSeq Acc Id: XM_038006353   ⟹   XP_037862281
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666045237,777 - 265,418 (-)NCBI
RefSeq Acc Id: XM_038006354   ⟹   XP_037862282
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666045237,777 - 265,422 (-)NCBI
RefSeq Acc Id: XM_038006355   ⟹   XP_037862283
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666045237,777 - 265,422 (-)NCBI
RefSeq Acc Id: XP_007996305   ⟸   XM_007998114
- Peptide Label: isoform X3
- UniProtKB: A0A0D9S5X6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037862283   ⟸   XM_038006355
- Peptide Label: isoform X6
- UniProtKB: A0A0D9S5X6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037862282   ⟸   XM_038006354
- Peptide Label: isoform X5
- UniProtKB: A0A0D9S5X6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037862280   ⟸   XM_038006352
- Peptide Label: isoform X2
- UniProtKB: A0A0D9S5X6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037862279   ⟸   XM_038006351
- Peptide Label: isoform X1
- UniProtKB: A0A0D9S5X6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037862281   ⟸   XM_038006353
- Peptide Label: isoform X4
- UniProtKB: A0A0D9S5X6 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000001764 UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000016765.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.390 UniProtKB/TrEMBL
  6.10.250.1820 UniProtKB/TrEMBL
  Ankyrin repeat-containing domain UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  MYPT1/MYPT2/Mbs85 UniProtKB/TrEMBL
  PP1_Regulatory_Subunit UniProtKB/TrEMBL
  PRKG1_interact UniProtKB/TrEMBL
NCBI Gene PPP1R12C ENTREZGENE
PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 UniProtKB/TrEMBL
  PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12C UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
  PRKG1_interact UniProtKB/TrEMBL
PIRSF PP1_12ABC_vert UniProtKB/TrEMBL
PRINTS ANKYRIN UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
Superfamily-SCOP Ankyrin repeat UniProtKB/TrEMBL
UniProt A0A0D9S5X6 ENTREZGENE, UniProtKB/TrEMBL