FHAD1 (forkhead associated phosphopeptide binding domain 1) - Rat Genome Database

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Gene: FHAD1 (forkhead associated phosphopeptide binding domain 1) Chlorocebus sabaeus
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Symbol: FHAD1
Name: forkhead associated phosphopeptide binding domain 1
RGD ID: 18358038
Description: INVOLVED IN apoptotic process (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH chromosome 1p36 deletion syndrome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: forkhead-associated domain-containing protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120116,869,897 - 117,030,697 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20116,868,649 - 116,972,606 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605420,583,405 - 20,742,630 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
FHAD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120116,869,897 - 117,030,697 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20116,868,649 - 116,972,606 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605420,583,405 - 20,742,630 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
FHAD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38115,236,521 - 15,403,010 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl115,236,521 - 15,400,283 (+)EnsemblGRCh38hg38GRCh38
GRCh37115,573,719 - 15,724,824 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36115,442,755 - 15,597,360 (+)NCBINCBI36Build 36hg18NCBI36
Celera114,056,662 - 14,207,494 (+)NCBICelera
Cytogenetic Map1p36.21NCBI
HuRef114,093,760 - 14,244,702 (+)NCBIHuRef
CHM1_1115,372,202 - 15,523,326 (+)NCBICHM1_1
T2T-CHM13v2.0114,680,876 - 14,854,268 (+)NCBIT2T-CHM13v2.0
Fhad1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394141,617,741 - 141,742,438 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4141,617,749 - 141,742,393 (-)EnsemblGRCm39 Ensembl
GRCm384141,890,430 - 142,015,127 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4141,890,438 - 142,015,082 (-)EnsemblGRCm38mm10GRCm38
MGSCv374141,446,766 - 141,567,552 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364141,188,365 - 141,194,502 (-)NCBIMGSCv36mm8
Celera4143,709,537 - 143,827,974 (-)NCBICelera
Cytogenetic Map4D3NCBI
cM Map474.75NCBI
Fhad1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85159,474,111 - 159,593,455 (-)NCBIGRCr8
mRatBN7.25154,191,593 - 154,310,442 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5154,191,745 - 154,310,354 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5156,876,702 - 156,995,740 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05158,650,009 - 158,769,057 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05158,639,164 - 158,758,166 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05160,438,575 - 160,555,103 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5160,437,896 - 160,555,083 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05164,150,291 - 164,266,444 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45160,790,716 - 160,869,013 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera5152,543,594 - 152,660,593 (-)NCBICelera
Cytogenetic Map5q36NCBI
Fhad1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555272,757,588 - 2,879,343 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555272,756,630 - 2,879,135 (-)NCBIChiLan1.0ChiLan1.0
FHAD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21211,519,730 - 211,683,769 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11210,766,926 - 210,930,971 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0114,374,663 - 14,538,696 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1115,368,132 - 15,532,904 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl115,403,965 - 15,529,961 (+)Ensemblpanpan1.1panPan2
FHAD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1282,114,228 - 82,232,464 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl282,114,227 - 82,239,533 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha278,651,560 - 78,773,849 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0282,763,459 - 82,885,818 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl282,763,458 - 82,886,141 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1279,516,220 - 79,638,502 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0280,534,228 - 80,656,711 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0281,598,878 - 81,721,339 (-)NCBIUU_Cfam_GSD_1.0
Fhad1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505837,152,084 - 37,279,625 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364742,978,895 - 3,103,488 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364742,978,895 - 3,104,393 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FHAD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl674,508,097 - 74,642,013 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1674,505,763 - 74,641,474 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2668,893,182 - 69,014,174 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Fhad1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247641,559,435 - 1,714,268 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247641,574,959 - 1,714,016 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_007980445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007980446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007980447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007980448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007980449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007980450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007980452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007980453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007980454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007980455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007980456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007980457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007980458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007980459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007980460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037985005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037985006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037985007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037985008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037985009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037985010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037985011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005235734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005235735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005235736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCSAT00000017704   ⟹   ENSCSAP00000017177
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl20116,868,649 - 116,972,606 (-)Ensembl
RefSeq Acc Id: XM_007980445   ⟹   XP_007978636
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.120116,869,897 - 117,030,696 (-)NCBI
Vero_WHO_p1.0NW_02366605420,586,150 - 20,742,628 (-)NCBI
Sequence:
RefSeq Acc Id: XM_037985005   ⟹   XP_037840933
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605420,596,752 - 20,742,630 (-)NCBI
RefSeq Acc Id: XM_037985006   ⟹   XP_037840934
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605420,596,752 - 20,742,629 (-)NCBI
RefSeq Acc Id: XM_037985007   ⟹   XP_037840935
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605420,596,751 - 20,742,630 (-)NCBI
RefSeq Acc Id: XM_037985008   ⟹   XP_037840936
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605420,596,751 - 20,742,630 (-)NCBI
RefSeq Acc Id: XM_037985009   ⟹   XP_037840937
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605420,583,405 - 20,742,627 (-)NCBI
RefSeq Acc Id: XM_037985010   ⟹   XP_037840938
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605420,583,405 - 20,742,627 (-)NCBI
RefSeq Acc Id: XM_037985011   ⟹   XP_037840939
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605420,583,405 - 20,742,627 (-)NCBI
RefSeq Acc Id: XR_005235734
Type: NON-CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605420,583,405 - 20,742,628 (-)NCBI
RefSeq Acc Id: XR_005235735
Type: NON-CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605420,583,405 - 20,742,628 (-)NCBI
RefSeq Acc Id: XR_005235736
Type: NON-CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605420,583,405 - 20,742,628 (-)NCBI
RefSeq Acc Id: XP_007978636   ⟸   XM_007980445
- Peptide Label: isoform X5
Ensembl Acc Id: ENSCSAP00000017177   ⟸   ENSCSAT00000017704
RefSeq Acc Id: XP_037840939   ⟸   XM_037985011
- Peptide Label: isoform X7
- UniProtKB: A0A0D9S8I8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037840937   ⟸   XM_037985009
- Peptide Label: isoform X6
- UniProtKB: A0A0D9S8I8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037840938   ⟸   XM_037985010
- Peptide Label: isoform X6
- UniProtKB: A0A0D9S8I8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037840936   ⟸   XM_037985008
- Peptide Label: isoform X4
RefSeq Acc Id: XP_037840935   ⟸   XM_037985007
- Peptide Label: isoform X3
RefSeq Acc Id: XP_037840933   ⟸   XM_037985005
- Peptide Label: isoform X1
RefSeq Acc Id: XP_037840934   ⟸   XM_037985006
- Peptide Label: isoform X2


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000000829 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000017704.1 UniProtKB/TrEMBL
InterPro CC-FHA_domain UniProtKB/TrEMBL
NCBI Gene FHAD1 ENTREZGENE
PANTHER FORKHEAD-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1 UniProtKB/TrEMBL
  FORKHEAD-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED UniProtKB/TrEMBL
UniProt A0A0D9S8I8 ENTREZGENE, UniProtKB/TrEMBL