KIF15 (kinesin family member 15) - Rat Genome Database

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Gene: KIF15 (kinesin family member 15) Chlorocebus sabaeus
Analyze
Symbol: KIF15
Name: kinesin family member 15
RGD ID: 18347033
Description: ENCODES a protein that exhibits ATP binding (inferred); cytoskeletal motor activity (inferred); microtubule binding (inferred); INVOLVED IN microtubule-based movement (inferred); ASSOCIATED WITH Braddock-Carey Syndrome 2 (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (inferred); cytoskeleton (inferred); microtubule (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: kinesin-like protein KIF15
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1226,238,804 - 6,325,804 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl226,249,567 - 6,325,510 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041160,843,580 - 160,934,979 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
cytoskeleton  (IEA)
microtubule  (IEA)
spindle  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
KIF15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1226,238,804 - 6,325,804 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl226,249,567 - 6,325,510 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041160,843,580 - 160,934,979 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
KIF15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38344,761,794 - 44,868,687 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl344,761,721 - 44,873,376 (+)EnsemblGRCh38hg38GRCh38
GRCh37344,803,286 - 44,894,748 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36344,778,289 - 44,869,749 (+)NCBINCBI36Build 36hg18NCBI36
Build 34344,778,288 - 44,869,747NCBI
Celera344,741,197 - 44,832,714 (+)NCBICelera
Cytogenetic Map3p21.31NCBI
HuRef344,847,405 - 44,938,611 (+)NCBIHuRef
CHM1_1344,753,248 - 44,844,760 (+)NCBICHM1_1
T2T-CHM13v2.0344,777,475 - 44,868,975 (+)NCBIT2T-CHM13v2.0
Kif15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399122,780,146 - 122,847,798 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9122,780,111 - 122,847,798 (+)EnsemblGRCm39 Ensembl
GRCm389122,951,081 - 123,018,733 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9122,951,046 - 123,018,733 (+)EnsemblGRCm38mm10GRCm38
MGSCv379122,860,199 - 122,927,851 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369122,799,779 - 122,867,431 (+)NCBIMGSCv36mm8
Celera9123,404,317 - 123,472,385 (+)NCBICelera
Cytogenetic Map9F4NCBI
cM Map973.31NCBI
Kif15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88131,479,340 - 131,550,209 (+)NCBIGRCr8
mRatBN7.28122,601,888 - 122,672,750 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8122,601,897 - 122,672,750 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8128,191,281 - 128,261,893 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08126,390,228 - 126,460,834 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08124,218,595 - 124,289,249 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08132,033,117 - 132,103,528 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8132,032,944 - 132,103,927 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08131,187,617 - 131,258,348 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48127,694,272 - 127,764,633 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18127,714,008 - 127,784,370 (+)NCBI
Celera8121,716,052 - 121,786,706 (+)NCBICelera
Cytogenetic Map8q32NCBI
Kif15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542026,775,120 - 26,827,660 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542026,774,506 - 26,828,301 (-)NCBIChiLan1.0ChiLan1.0
KIF15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2244,713,879 - 44,811,688 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1344,718,645 - 44,816,400 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0344,656,791 - 44,774,655 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1345,713,962 - 45,829,566 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl345,713,962 - 45,809,700 (+)Ensemblpanpan1.1panPan2
KIF15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12043,454,025 - 43,532,361 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2043,359,206 - 43,532,219 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2043,369,619 - 43,447,901 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02043,939,168 - 44,017,280 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2043,939,398 - 44,005,257 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12043,177,302 - 43,255,669 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02043,584,824 - 43,663,261 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02043,861,856 - 43,940,735 (-)NCBIUU_Cfam_GSD_1.0
Kif15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118198,508,831 - 198,567,139 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936695861,550 - 919,368 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936695861,324 - 919,368 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIF15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1327,966,586 - 28,041,451 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11327,966,586 - 28,041,121 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21330,809,858 - 30,871,057 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Kif15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473075,644,163 - 75,707,043 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473075,644,242 - 75,707,159 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in KIF15
2358 total Variants

Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence


Ensembl Acc Id: ENSCSAT00000014545   ⟹   ENSCSAP00000012514
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl226,249,567 - 6,325,510 (+)Ensembl
RefSeq Acc Id: XM_038004071   ⟹   XP_037859999
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666041160,843,580 - 160,934,979 (-)NCBI
RefSeq Acc Id: XM_038004072   ⟹   XP_037860000
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666041160,845,819 - 160,934,979 (-)NCBI
RefSeq Acc Id: XM_038004073   ⟹   XP_037860001
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666041160,850,464 - 160,934,979 (-)NCBI
Protein Sequences
Protein RefSeqs XP_037859999 (Get FASTA)   NCBI Sequence Viewer  
  XP_037860000 (Get FASTA)   NCBI Sequence Viewer  
  XP_037860001 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000012514.1
Ensembl Acc Id: ENSCSAP00000012514   ⟸   ENSCSAT00000014545
RefSeq Acc Id: XP_037859999   ⟸   XM_038004071
- Peptide Label: isoform X1
- UniProtKB: A0A0D9RV75 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037860000   ⟸   XM_038004072
- Peptide Label: isoform X2
- UniProtKB: A0A0D9RV75 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037860001   ⟸   XM_038004073
- Peptide Label: isoform X3
- UniProtKB: A0A0D9RV75 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000016538 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000014545.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.850.10 UniProtKB/TrEMBL
InterPro HMMR_C UniProtKB/TrEMBL
  KIF15/KIN-12E UniProtKB/TrEMBL
  Kinesin_motor_dom UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
NCBI Gene KIF15 ENTREZGENE
PANTHER KINESIN-LIKE PROTEIN KIN-12D UniProtKB/TrEMBL
  PTHR37739 UniProtKB/TrEMBL
Pfam HMMR_C UniProtKB/TrEMBL
  Kinesin UniProtKB/TrEMBL
PRINTS KINESINHEAVY UniProtKB/TrEMBL
PROSITE KINESIN_MOTOR_2 UniProtKB/TrEMBL
SMART KISc UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A0D9RV75 ENTREZGENE, UniProtKB/TrEMBL