AC093577.1 (novel transcript) - Rat Genome Database

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Gene: AC093577.1 (novel transcript) Homo sapiens
Analyze
Symbol: AC093577.1
Name: novel transcript
RGD ID: 16572869
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Previously known as: AC093577.2
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38192,978,270 - 92,987,407 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl192,978,265 - 92,987,367 (+)EnsemblGRCh38hg38GRCh38
Cytogenetic Map1p22.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:187
Count of miRNA genes:182
Interacting mature miRNAs:187
Transcripts:ENST00000408239
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_007066223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC093577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000664771
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl192,978,265 - 92,987,367 (+)Ensembl
RefSeq Acc Id: XR_007066223
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38192,978,270 - 92,987,407 (+)NCBI

Additional Information

Database Acc Id Source(s)
COSMIC AC093577.1 COSMIC
Ensembl Genes ENSG00000287797 Ensembl, ENTREZGENE
Ensembl Transcript ENST00000664771 ENTREZGENE
GTEx ENSG00000287797 GTEx
Human Proteome Map AC093577.1 Human Proteome Map
NCBI Gene LOC124904219 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-08-20 AC093577.1  novel transcript  AC093577.2  novel transcript  Symbol and/or name change 19259462 PROVISIONAL
2020-02-07 AC093577.2  novel transcript  AC093577.1  novel transcript  Symbol and/or name change 19259462 PROVISIONAL