AC139768.1 (novel transcript) - Rat Genome Database

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Gene: AC139768.1 (novel transcript) Homo sapiens
Analyze
Symbol: AC139768.1
Name: novel transcript
RGD ID: 16568459
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1251,201,684 - 51,202,581 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:160
Count of miRNA genes:155
Interacting mature miRNAs:160
Transcripts:ENST00000599633
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 109 141 311 21 181 66 274 4 263 264 6 176
Low 2227 2512 1129 390 1391 232 4135 2118 3387 177 991 1194 170 1198 2611 4
Below cutoff 15 306 44 43 329 43 2 8 2 1 5 3 1

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000620274
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1251,201,684 - 51,202,581 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC139768.1 COSMIC
Ensembl Genes ENSG00000278126 Ensembl
GTEx ENSG00000278126 GTEx
Human Proteome Map AC139768.1 Human Proteome Map