U2 (U2 spliceosomal RNA) - Rat Genome Database

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Pathways
Gene: U2 (U2 spliceosomal RNA) Homo sapiens
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Symbol: U2
Name: U2 spliceosomal RNA
RGD ID: 16567926
Description: ENCODES an snrna that exhibits pre-mRNA branch point binding (inferred); INVOLVED IN mRNA branch site recognition (inferred); FOUND IN U2 snRNP (inferred)
Type: snrna
RefSeq Status: MODEL
Previously known as: AC024051.8
RGD Orthologs
Mouse
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381743,266,633 - 43,266,823 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1743,266,633 - 43,266,823 (-)Ensemblhg38GRCh38
Cytogenetic Map17q21.31NCBI
T2T-CHM13v2.01744,134,682 - 44,134,872 (+)NCBIT2T-CHM13v2.0
JBrowse:





Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
U2HumanmRNA branch site recognition involved_inIEARfam:RF00004150520179 RNAcentralGO_REF:0000115

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
U2HumanU2 snRNP part_ofIEARfam:RF00004150520179 RNAcentralGO_REF:0000115

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
U2Humanpre-mRNA branch point binding enablesIEARfam:RF00004150520179 RNAcentralGO_REF:0000115



U2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381743,266,633 - 43,266,823 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1743,266,633 - 43,266,823 (-)Ensemblhg38GRCh38
Cytogenetic Map17q21.31NCBI
T2T-CHM13v2.01744,134,682 - 44,134,872 (+)NCBIT2T-CHM13v2.0
Gm23444
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391183,162,324 - 83,162,514 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1183,162,324 - 83,162,514 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381183,271,498 - 83,271,688 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1183,271,498 - 83,271,688 (+)Ensemblmm10GRCm38
Cytogenetic Map11CNCBI

.



alimentary part of gastrointestinal system
ectoderm
endocrine system
endoderm
entire extraembryonic component
hemolymphoid system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
1 7 1 3 1 8 6 12 10 1 2 1 4 2



Ensembl Acc Id: ENST00000613778
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1743,266,633 - 43,266,823 (-)Ensembl
RefSeq Acc Id: XR_007066012
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381743,266,633 - 43,266,823 (-)NCBI
RefSeq Acc Id: XR_007088042
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01744,134,682 - 44,134,872 (+)NCBI


Database
Acc Id
Source(s)
COSMIC U2 COSMIC
Ensembl Genes ENSG00000276596 Ensembl, ENTREZGENE
Ensembl Transcript ENST00000613778 ENTREZGENE
GTEx ENSG00000276596 GTEx
Human Proteome Map U2 Human Proteome Map
NCBI Gene LOC124904139 ENTREZGENE
RNAcentral URS00006A3E7F RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-08-20 U2  U2 spliceosomal RNA  AC024051.8    Symbol and/or name change 19259462 PROVISIONAL
2020-02-07 AC024051.8    U2  U2 spliceosomal RNA  Symbol and/or name change 19259462 PROVISIONAL