AL139098.2 (sialic acid binding Ig-like lectin 7 (SIGLEC7) pseudogene) - Rat Genome Database

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Gene: AL139098.2 (sialic acid binding Ig-like lectin 7 (SIGLEC7) pseudogene) Homo sapiens
Analyze
Symbol: AL139098.2
Name: sialic acid binding Ig-like lectin 7 (SIGLEC7) pseudogene
RGD ID: 16566513
Description:
Type: transcribed_unprocessed_pseudogene
Previously known as: AL139098.3
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl6121,389,324 - 121,390,357 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:220
Count of miRNA genes:209
Interacting mature miRNAs:218
Transcripts:ENST00000608233
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system adipose tissue appendage
High
Medium
Low 3 1 3 1 1
Below cutoff 8 10 6 2 13 2 15 6 14 2 62 9 2 12

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000608233
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl6121,389,324 - 121,390,357 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL139098.2 COSMIC
Ensembl Genes ENSG00000272714 Ensembl
GTEx ENSG00000272714 GTEx
Human Proteome Map AL139098.2 Human Proteome Map


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-08-20 AL139098.2  sialic acid binding Ig-like lectin 7 (SIGLEC7) pseudogene  AL139098.3  sialic acid binding Ig-like lectin 7 (SIGLEC7) pseudogene  Symbol and/or name change 19259462 PROVISIONAL
2020-02-07 AL139098.3  sialic acid binding Ig-like lectin 7 (SIGLEC7) pseudogene  AL139098.2  sialic acid binding Ig-like lectin 7 (SIGLEC7) pseudogene  Symbol and/or name change 19259462 PROVISIONAL