AL080317.2 (novel transcript, antisense to REV3L) - Rat Genome Database

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Gene: AL080317.2 (novel transcript, antisense to REV3L) Homo sapiens
Analyze
Symbol: AL080317.2
Name: novel transcript, antisense to REV3L
RGD ID: 16566358
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl6111,309,203 - 111,313,517 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:128
Count of miRNA genes:125
Interacting mature miRNAs:128
Transcripts:ENST00000607434
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1 1 3 1 8
Low 2287 1677 1625 550 1205 399 3682 1259 3037 362 1392 1561 162 1155 2169 4
Below cutoff 144 1293 97 71 726 64 673 934 671 55 47 47 8 49 619

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000607434
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl6111,309,203 - 111,313,517 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL080317.2 COSMIC
Ensembl Genes ENSG00000272356 Ensembl
GTEx ENSG00000272356 GTEx
Human Proteome Map AL080317.2 Human Proteome Map