AC004805.2 (dynactin 6 (DCTN6) pseudogene) - Rat Genome Database

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Gene: AC004805.2 (dynactin 6 (DCTN6) pseudogene) Homo sapiens
Analyze
Symbol: AC004805.2
Name: dynactin 6 (DCTN6) pseudogene
RGD ID: 16565711
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1765,654,914 - 65,655,395 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:76
Count of miRNA genes:74
Interacting mature miRNAs:75
Transcripts:ENST00000605382
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 12 23 17 1 20 1 84 8 63 3 37 31 24 65
Below cutoff 432 449 400 74 92 42 1047 359 667 58 460 409 34 415 650

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000605382
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1765,654,914 - 65,655,395 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC004805.2 COSMIC
Ensembl Genes ENSG00000270870 Ensembl
GTEx ENSG00000270870 GTEx
Human Proteome Map AC004805.2 Human Proteome Map