AC104692.2 (nuclear protein, transcriptional regulator, 1-like, pseudogene) - Rat Genome Database

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Gene: AC104692.2 (nuclear protein, transcriptional regulator, 1-like, pseudogene) Homo sapiens
Analyze
Symbol: AC104692.2
Name: nuclear protein, transcriptional regulator, 1-like, pseudogene
RGD ID: 16565504
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl7152,366,763 - 152,367,015 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:106
Count of miRNA genes:105
Interacting mature miRNAs:106
Transcripts:ENST00000603054
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1 3 2 4 1 45 1 3
Low 898 1062 593 167 374 91 1711 855 1419 107 472 564 76 507 1173 1
Below cutoff 148 338 111 39 273 29 318 113 207 23 105 124 11 71 185

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000603054
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl7152,366,763 - 152,367,015 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC104692.2 COSMIC
Ensembl Genes ENSG00000270405 Ensembl
GTEx ENSG00000270405 GTEx
Human Proteome Map AC104692.2 Human Proteome Map