AC024603.1 (novel transcript, antisense to C10orf11) - Rat Genome Database

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Gene: AC024603.1 (novel transcript, antisense to C10orf11) Homo sapiens
Analyze
Symbol: AC024603.1
Name: novel transcript, antisense to C10orf11
RGD ID: 16565143
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1076,558,350 - 76,560,994 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:140
Count of miRNA genes:136
Interacting mature miRNAs:138
Transcripts:ENST00000597938
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 20 71 35 80 105 20 82 2 116 38 33 74
Below cutoff 371 659 441 67 162 38 1072 471 1176 76 441 335 29 351 727

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000597938
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1076,558,350 - 76,560,994 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC024603.1 COSMIC
Ensembl Genes ENSG00000269256 Ensembl
GTEx ENSG00000269256 GTEx
Human Proteome Map AC024603.1 Human Proteome Map