AL353997.4 (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide (YWHAE) pseudogene) - Rat Genome Database

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Gene: AL353997.4 (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide (YWHAE) pseudogene) Homo sapiens
Analyze
Symbol: AL353997.4
Name: tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide (YWHAE) pseudogene
RGD ID: 16564673
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1718,453,574 - 18,453,739 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:346
Count of miRNA genes:324
Interacting mature miRNAs:336
Transcripts:ENST00000332088, ENST00000586196
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 1 3 2 2 2 3 1 3 9 6 2 1
Below cutoff 8 8 9 11 3 5 31 13 17 1 41 13 6 6 13

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000586196
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1718,453,574 - 18,453,739 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL353997.4 COSMIC
Ensembl Genes ENSG00000267492 Ensembl
GTEx ENSG00000267492 GTEx
Human Proteome Map AL353997.4 Human Proteome Map