AC079336.4 (novel transcript, antisense MYO1D) - Rat Genome Database

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Gene: AC079336.4 (novel transcript, antisense MYO1D) Homo sapiens
Analyze
Symbol: AC079336.4
Name: novel transcript, antisense MYO1D
RGD ID: 16564272
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1732,518,953 - 32,531,492 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:57
Count of miRNA genes:56
Interacting mature miRNAs:57
Transcripts:ENST00000584219
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 30 46 25 1 176 1 60 5 72 6 397 42 11 29 1
Below cutoff 325 377 326 90 309 53 698 169 1016 93 225 371 38 163 395

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000584219
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1732,518,953 - 32,531,492 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC079336.4 COSMIC
Ensembl Genes ENSG00000266599 Ensembl
GTEx ENSG00000266599 GTEx
Human Proteome Map AC079336.4 Human Proteome Map