AC100830.3 (novel transcript, antisense to ornithine decarboxylase antizyme 2 OAZ2) - Rat Genome Database

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Gene: AC100830.3 (novel transcript, antisense to ornithine decarboxylase antizyme 2 OAZ2) Homo sapiens
Analyze
Symbol: AC100830.3
Name: novel transcript, antisense to ornithine decarboxylase antizyme 2 OAZ2
RGD ID: 16564163
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1564,695,041 - 64,695,594 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:418
Count of miRNA genes:348
Interacting mature miRNAs:380
Transcripts:ENST00000560387, ENST00000583044
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 5 62 2 58 8 2 8 3 3 2 6
Low 2252 2719 1413 371 1182 214 3796 1799 3438 124 1151 1298 161 1194 2509 2
Below cutoff 7 171 48 47 38 46 271 362 140 11 2 2 1 8 266

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000583044
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1564,695,041 - 64,695,594 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC100830.3 COSMIC
Ensembl Genes ENSG00000265967 Ensembl
GTEx ENSG00000265967 GTEx
Human Proteome Map AC100830.3 Human Proteome Map