AC103808.3 (novel transcript) - Rat Genome Database

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Gene: AC103808.3 (novel transcript) Homo sapiens
Analyze
Symbol: AC103808.3
Name: novel transcript
RGD ID: 16564122
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1876,254,292 - 76,255,214 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:128
Count of miRNA genes:126
Interacting mature miRNAs:127
Transcripts:ENST00000579714
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1 3 2 12 2 7 3 6 1 3 11
Low 22 14 41 29 40 28 44 19 47 17 447 57 2 6 21 2
Below cutoff 562 426 319 69 161 49 863 473 1600 86 320 325 23 221 637 1

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000579714
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1876,254,292 - 76,255,214 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC103808.3 COSMIC
Ensembl Genes ENSG00000265717 Ensembl
GTEx ENSG00000265717 GTEx
Human Proteome Map AC103808.3 Human Proteome Map