AC124254.2 (novel transcript) - Rat Genome Database

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Gene: AC124254.2 (novel transcript) Homo sapiens
Analyze
Symbol: AC124254.2
Name: novel transcript
RGD ID: 16563838
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1877,421,619 - 77,561,044 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:184
Count of miRNA genes:178
Interacting mature miRNAs:184
Transcripts:ENST00000583629
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 2 1 2 1 1 13
Low 79 8 29 16 111 19 224 33 63 43 147 164 6 35 8 4
Below cutoff 677 261 311 55 205 28 675 361 1049 132 521 442 30 416 344

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000583629
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1877,421,619 - 77,561,044 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC124254.2 COSMIC
Ensembl Genes ENSG00000264015 Ensembl
GTEx ENSG00000264015 GTEx
Human Proteome Map AC124254.2 Human Proteome Map