AC005632.3 (novel transcript, sense intronic to METTL9) - Rat Genome Database

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Gene: AC005632.3 (novel transcript, sense intronic to METTL9) Homo sapiens
Analyze
Symbol: AC005632.3
Name: novel transcript, sense intronic to METTL9
RGD ID: 16563353
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1621,626,742 - 21,627,569 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:115
Count of miRNA genes:111
Interacting mature miRNAs:113
Transcripts:ENST00000564271
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 3 511 31 2 720 2 4 4 2 1 11 134 2
Low 1632 1435 1524 504 1125 377 3061 913 3087 383 1283 1342 135 1009 1742 4
Below cutoff 765 973 159 108 70 77 1236 1219 606 34 148 126 35 189 997

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000564271
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1621,626,742 - 21,627,569 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC005632.3 COSMIC
Ensembl Genes ENSG00000261596 Ensembl
GTEx ENSG00000261596 GTEx
Human Proteome Map AC005632.3 Human Proteome Map