AC107027.3 (novel transcript, overlapping to MRPL3) - Rat Genome Database

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Gene: AC107027.3 (novel transcript, overlapping to MRPL3) Homo sapiens
Analyze
Symbol: AC107027.3
Name: novel transcript, overlapping to MRPL3
RGD ID: 16563129
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl3131,455,126 - 131,458,598 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:62
Count of miRNA genes:61
Interacting mature miRNAs:61
Transcripts:ENST00000565095
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1 1 1 2 1 22 2
Low 2404 1972 1485 394 1207 235 4322 2009 3131 395 1396 1526 170 1186 2774 4
Below cutoff 27 963 237 228 688 229 33 184 575 21 30 80 18 14

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000565095
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3131,455,126 - 131,458,598 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC107027.3 COSMIC
Ensembl Genes ENSG00000261167 Ensembl
GTEx ENSG00000261167 GTEx
Human Proteome Map AC107027.3 Human Proteome Map