AC026461.2 (novel transcript) - Rat Genome Database

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Gene: AC026461.2 (novel transcript) Homo sapiens
Analyze
Symbol: AC026461.2
Name: novel transcript
RGD ID: 16562480
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1656,648,881 - 56,652,636 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:274
Count of miRNA genes:263
Interacting mature miRNAs:274
Transcripts:ENST00000568608
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium
Low 8 44 42 5 42 1 1 2 10 6
Below cutoff 7 48 43 7 43 3 1 7 18 19

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000568608
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,648,881 - 56,652,636 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC026461.2 COSMIC
Ensembl Genes ENSG00000259923 Ensembl
GTEx ENSG00000259923 GTEx
Human Proteome Map AC026461.2 Human Proteome Map