AC145141.2 (novel transcript) - Rat Genome Database

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Gene: AC145141.2 (novel transcript) Homo sapiens
Analyze
Symbol: AC145141.2
Name: novel transcript
RGD ID: 16560034
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl571,372,676 - 71,374,898 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:167
Count of miRNA genes:151
Interacting mature miRNAs:153
Transcripts:ENST00000518473, ENST00000578031
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 2
Low 2 2 25 13 13 2 15 10 372 33 2 1
Below cutoff 93 94 282 142 34 132 148 65 202 16 155 127 10 31 100

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000518473
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl571,372,676 - 71,374,898 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC145141.2 COSMIC
Ensembl Genes ENSG00000253985 Ensembl
GTEx ENSG00000253985 GTEx
Human Proteome Map AC145141.2 Human Proteome Map