AC024451.2 (NSFL1 (p97) cofactor (p47) (NSFL1C) pseudogene) - Rat Genome Database

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Gene: AC024451.2 (NSFL1 (p97) cofactor (p47) (NSFL1C) pseudogene) Homo sapiens
Analyze
Symbol: AC024451.2
Name: NSFL1 (p97) cofactor (p47) (NSFL1C) pseudogene
RGD ID: 16559694
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl847,511,034 - 47,512,141 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:370
Count of miRNA genes:349
Interacting mature miRNAs:362
Transcripts:ENST00000519856
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1 1 1 1 1 3 2 3 33 1 1
Low 1516 1516 1245 420 1084 295 2822 725 1117 331 1237 1338 134 1004 1702 2
Below cutoff 863 1399 450 188 677 155 1429 1344 2343 70 161 214 36 197 1007 2

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000519856
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl847,511,034 - 47,512,141 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC024451.2 COSMIC
Ensembl Genes ENSG00000253330 Ensembl
GTEx ENSG00000253330 GTEx
Human Proteome Map AC024451.2 Human Proteome Map