AC107027.2 (pseudogene similar to part of copine IV) - Rat Genome Database

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Gene: AC107027.2 (pseudogene similar to part of copine IV) Homo sapiens
Analyze
Symbol: AC107027.2
Name: pseudogene similar to part of copine IV
RGD ID: 16559259
Description:
Type: unprocessed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl3131,537,571 - 131,537,685 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:205
Count of miRNA genes:187
Interacting mature miRNAs:191
Transcripts:ENST00000512197
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 2 2 1 1
Low 12 50 70 4 25 2 52 20 167 21 204 71 2 8 11
Below cutoff 50 95 106 9 28 1 45 71 346 13 126 26 10 36 18

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000512197
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3131,537,571 - 131,537,685 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC107027.2 COSMIC
Ensembl Genes ENSG00000251447 Ensembl
GTEx ENSG00000251447 GTEx
Human Proteome Map AC107027.2 Human Proteome Map