AC112673.1 (transmembrane protein 126A (TMEM126A) pseudogene) - Rat Genome Database

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Gene: AC112673.1 (transmembrane protein 126A (TMEM126A) pseudogene) Homo sapiens
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Symbol: AC112673.1
Name: transmembrane protein 126A (TMEM126A) pseudogene
RGD ID: 16558642
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: LOC100420053; transmembrane protein 126A pseudogene
Related Functional Gene: TMEM126A  
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38810,336,783 - 10,337,656 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl810,336,782 - 10,337,677 (-)EnsemblGRCh38hg38GRCh38
GRCh37810,194,293 - 10,195,166 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map8p23.1NCBI
HuRef89,124,660 - 9,125,533 (-)NCBIHuRef
CHM1_1810,260,116 - 10,260,989 (-)NCBICHM1_1
T2T-CHM13v2.089,401,553 - 9,402,425 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in AC112673.1
1 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:33
Count of miRNA genes:33
Interacting mature miRNAs:33
Transcripts:ENST00000513168
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
309 449 485 312 1708 362 454 123 450 85 558 1241 1237 4 1431 214 567 311 38

Sequence


Ensembl Acc Id: ENST00000513168
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl810,336,782 - 10,337,677 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC112673.1 COSMIC
Ensembl Genes ENSG00000249848 Ensembl, ENTREZGENE
GTEx ENSG00000249848 GTEx
Human Proteome Map AC112673.1 Human Proteome Map
NCBI Gene LOC100420053 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-06-25 AC112673.1  transmembrane protein 126A (TMEM126A) pseudogene  LOC100420053  transmembrane protein 126A pseudogene  Symbol and/or name change 19259462 PROVISIONAL
2020-06-18 LOC100420053  transmembrane protein 126A pseudogene  AC112673.1  transmembrane protein 126A (TMEM126A) pseudogene  Symbol and/or name change 5135510 APPROVED