AC091868.2 (novel transcript) - Rat Genome Database

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Gene: AC091868.2 (novel transcript) Homo sapiens
Analyze
Symbol: AC091868.2
Name: novel transcript
RGD ID: 16558457
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl573,778,039 - 73,786,491 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:263
Count of miRNA genes:250
Interacting mature miRNAs:253
Transcripts:ENST00000506717
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1
Low 160 300 407 165 35 46 1141 73 605 30 296 379 119 235 812
Below cutoff 936 831 887 260 228 216 1576 626 953 194 662 699 47 618 870 1

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000506717
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl573,778,039 - 73,786,491 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC091868.2 COSMIC
Ensembl Genes ENSG00000249293 Ensembl
GTEx ENSG00000249293 GTEx
Human Proteome Map AC091868.2 Human Proteome Map