CCZ1P1 (CCZ1 pseudogene 1) - Rat Genome Database

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Gene: CCZ1P1 (CCZ1 pseudogene 1) Homo sapiens
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Symbol: CCZ1P1
Name: CCZ1 pseudogene 1
RGD ID: 16557779
HGNC Page HGNC:55746
Description:
Type: pseudo (Ensembl: transcribed_unprocessed_pseudogene)
RefSeq Status: INFERRED
Previously known as: AC004967.1; CCZ1 homolog, vacuolar protein trafficking and biogenesis associated (CCZ1) pseudogene; CCZ1 homolog, vacuolar protein trafficking and biogenesis associated pseudogene; CCZ1P
Related Functional Gene: CCZ1  
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38797,969,005 - 97,972,321 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl797,969,005 - 97,972,254 (-)EnsemblGRCh38hg38GRCh38
GRCh37797,598,317 - 97,601,633 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map7q21.3NCBI
T2T-CHM13v2.0799,199,098 - 99,202,413 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:95
Count of miRNA genes:91
Interacting mature miRNAs:93
Transcripts:ENST00000453589
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
1204 2431 2788 2241 4941 1718 2340 4 617 1939 459 2268 7258 6437 52 3707 847 1728 1612 170

Sequence


Ensembl Acc Id: ENST00000453589
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl797,969,005 - 97,972,254 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC CCZ1P1 COSMIC
Ensembl Genes ENSG00000243554 Ensembl, ENTREZGENE
GTEx ENSG00000243554 GTEx
HGNC ID HGNC:55746 ENTREZGENE
Human Proteome Map CCZ1P1 Human Proteome Map
NCBI Gene CCZ1P ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-07-26 CCZ1P1  CCZ1 pseudogene 1  AC004967.1  CCZ1 homolog, vacuolar protein trafficking and biogenesis associated (CCZ1) pseudogene  Symbol and/or name change 19259463 PROVISIONAL
2020-07-02 AC004967.1  CCZ1 homolog, vacuolar protein trafficking and biogenesis associated (CCZ1) pseudogene  CCZ1P  CCZ1 homolog, vacuolar protein trafficking and biogenesis associated pseudogene  Symbol and/or name change 19259462 PROVISIONAL
2020-06-30 CCZ1P  CCZ1 homolog, vacuolar protein trafficking and biogenesis associated pseudogene  AC004967.1  CCZ1 homolog, vacuolar protein trafficking and biogenesis associated (CCZ1) pseudogene  Symbol and/or name change 5135510 APPROVED
2020-06-25 AC004967.1  CCZ1 homolog, vacuolar protein trafficking and biogenesis associated (CCZ1) pseudogene  CCZ1P  CCZ1 homolog, vacuolar protein trafficking and biogenesis associated pseudogene  Symbol and/or name change 19259462 PROVISIONAL
2020-06-18 CCZ1P  CCZ1 homolog, vacuolar protein trafficking and biogenesis associated pseudogene  AC004967.1  CCZ1 homolog, vacuolar protein trafficking and biogenesis associated (CCZ1) pseudogene  Symbol and/or name change 5135510 APPROVED