MTCO3P47 (MT-CO3 pseudogene 47) - Rat Genome Database

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Pathways
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Gene: MTCO3P47 (MT-CO3 pseudogene 47) Homo sapiens
Analyze
Symbol: MTCO3P47 (Ensembl: AC104435.1)
Name: MT-CO3 pseudogene 47 (Ensembl:pseudogene similar to part of mitochondrially encoded cytochrome c oxidase III (MT-CO3))
RGD ID: 16557250
Description:
Type: processed_pseudogene
Previously known as: AC104435.1; pseudogene similar to part of mitochondrially encoded cytochrome c oxidase III (MT-CO3)
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl372,583,370 - 72,583,535 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:260
Count of miRNA genes:214
Interacting mature miRNAs:228
Transcripts:ENST00000483483
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 3 3 4 2 9 2 13 1 11 2 52 5 5 8
Below cutoff 35 39 58 19 25 17 93 37 77 8 114 37 2 30 62

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000483483
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl372,583,370 - 72,583,535 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC MTCO3P47 COSMIC
Ensembl Genes ENSG00000239568 Ensembl
GTEx ENSG00000239568 GTEx
Human Proteome Map MTCO3P47 Human Proteome Map


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-10-31 MTCO3P47  MT-CO3 pseudogene 47  AC104435.1  pseudogene similar to part of mitochondrially encoded cytochrome c oxidase III (MT-CO3)  Symbol and/or name change 19259463 PROVISIONAL