AC073111.1 (novel transcript) - Rat Genome Database

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Gene: AC073111.1 (novel transcript) Homo sapiens
Analyze
Symbol: AC073111.1
Name: novel transcript
RGD ID: 16557225
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl7150,379,854 - 150,383,885 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:287
Count of miRNA genes:273
Interacting mature miRNAs:287
Transcripts:ENST00000497366
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 2 17 1 1 333 7
Low 808 244 717 129 762 103 882 418 1726 160 538 572 34 83 588
Below cutoff 1307 1669 732 294 687 190 2031 1284 1747 167 410 747 106 736 1300 2

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000497366
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl7150,379,854 - 150,383,885 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC073111.1 COSMIC
Ensembl Genes ENSG00000239377 Ensembl
GTEx ENSG00000239377 GTEx
Human Proteome Map AC073111.1 Human Proteome Map