Z99755.1 (nerve growth factor receptor (TNFRSF16) associated protein 1 (NGFRAP1) pseudogene) - Rat Genome Database

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Gene: Z99755.1 (nerve growth factor receptor (TNFRSF16) associated protein 1 (NGFRAP1) pseudogene) Homo sapiens
Analyze
Symbol: Z99755.1
Name: nerve growth factor receptor (TNFRSF16) associated protein 1 (NGFRAP1) pseudogene
RGD ID: 16557084
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl2235,164,304 - 35,165,347 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:87
Count of miRNA genes:84
Interacting mature miRNAs:86
Transcripts:ENST00000414048
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system renal system reproductive system respiratory system
High
Medium 2
Low 14 2 14 13 169 13 6 21 33 19
Below cutoff 13 28 19 27 19 9 47 38 40

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000414048
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2235,164,304 - 35,165,347 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC Z99755.1 COSMIC
Ensembl Genes ENSG00000238153 Ensembl
GTEx ENSG00000238153 GTEx
Human Proteome Map Z99755.1 Human Proteome Map