AC068446.1 (p21 protein (Cdc42/Rac)-activated kinase 2 (PAK2) pseudogene) - Rat Genome Database

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Gene: AC068446.1 (p21 protein (Cdc42/Rac)-activated kinase 2 (PAK2) pseudogene) Homo sapiens
Analyze
Symbol: AC068446.1
Name: p21 protein (Cdc42/Rac)-activated kinase 2 (PAK2) pseudogene
RGD ID: 16556756
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1521,293,653 - 21,295,201 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:216
Count of miRNA genes:103
Interacting mature miRNAs:105
Transcripts:ENST00000431494, ENST00000556425
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 2 1 1 2 1
Low 138 266 530 73 132 68 420 73 750 109 377 441 6 11 357
Below cutoff 1853 1665 941 381 640 235 2989 1573 2260 238 897 948 153 830 1980 4

Sequence

Nucleotide Sequences

RefSeq Acc Id: ENST00000556425
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1521,293,653 - 21,295,201 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC068446.1 COSMIC
Ensembl Genes ENSG00000237161 Ensembl
GTEx ENSG00000237161 GTEx
Human Proteome Map AC068446.1 Human Proteome Map