AC096632.2 (novel pseudogene) - Rat Genome Database

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Gene: AC096632.2 (novel pseudogene) Homo sapiens
Analyze
Symbol: AC096632.2
Name: novel pseudogene
RGD ID: 16556011
Description:
Type: transcribed_unprocessed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1202,986,557 - 202,988,582 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:308
Count of miRNA genes:297
Interacting mature miRNAs:302
Transcripts:ENST00000417729, ENST00000438139
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 1
Low 1 1 8 1 1 56 3
Below cutoff 196 322 172 22 185 14 714 330 438 20 408 145 11 91 516

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000417729
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1202,987,277 - 202,988,482 (-)Ensembl
RefSeq Acc Id: ENST00000438139
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1202,986,557 - 202,988,582 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC096632.2 COSMIC
Ensembl Genes ENSG00000234761 Ensembl
GTEx ENSG00000234761 GTEx
Human Proteome Map AC096632.2 Human Proteome Map