AL353743.4 (kinesin family member 27 (KIF27) pseudogene) - Rat Genome Database

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Gene: AL353743.4 (kinesin family member 27 (KIF27) pseudogene) Homo sapiens
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Symbol: AL353743.4
Name: kinesin family member 27 (KIF27) pseudogene
RGD ID: 16555914
Description:
Type: pseudo (Ensembl: unprocessed_pseudogene)
RefSeq Status: INFERRED
Previously known as: kinesin family member 27 pseudogene; LOC100419824
Related Functional Gene: KIF27  
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38985,753,310 - 85,786,875 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl985,753,306 - 85,786,575 (+)EnsemblGRCh38hg38GRCh38
GRCh37988,368,225 - 88,401,790 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map9q21.33NCBI
HuRef958,192,592 - 58,225,854 (+)NCBIHuRef
CHM1_1988,514,919 - 88,548,113 (+)NCBICHM1_1
T2T-CHM13v2.0997,903,804 - 97,937,366 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:174
Count of miRNA genes:166
Interacting mature miRNAs:172
Transcripts:ENST00000418135, ENST00000422653
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
749 1195 1504 1082 3839 1191 1632 1 302 1173 203 1254 3896 3590 35 3283 490 1284 1243 106

Sequence


Ensembl Acc Id: ENST00000422653
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl985,753,306 - 85,786,575 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL353743.4 COSMIC
Ensembl Genes ENSG00000234424 Ensembl, ENTREZGENE
GTEx ENSG00000234424 GTEx
Human Proteome Map AL353743.4 Human Proteome Map
NCBI Gene LOC100419824 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-06-25 AL353743.4  kinesin family member 27 (KIF27) pseudogene  LOC100419824  kinesin family member 27 pseudogene  Symbol and/or name change 19259462 PROVISIONAL
2020-06-18 LOC100419824  kinesin family member 27 pseudogene  AL353743.4  kinesin family member 27 (KIF27) pseudogene  Symbol and/or name change 5135510 APPROVED