AL512326.5 (ubiquinol-cytochrome c reductase (6.4kD) subunit (UQCR) pseudogene) - Rat Genome Database

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Gene: AL512326.5 (ubiquinol-cytochrome c reductase (6.4kD) subunit (UQCR) pseudogene) Homo sapiens
Analyze
Symbol: AL512326.5
Name: ubiquinol-cytochrome c reductase (6.4kD) subunit (UQCR) pseudogene
RGD ID: 16555806
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1179,137,764 - 179,137,934 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:307
Count of miRNA genes:291
Interacting mature miRNAs:303
Transcripts:ENST00000424885
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 2 1 2 26
Low 48 53 38 9 41 9 114 17 56 18 98 87 6 58 54 1
Below cutoff 234 253 171 56 85 42 395 123 295 23 224 199 15 210 233

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000424885
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1179,137,764 - 179,137,934 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL512326.5 COSMIC
Ensembl Genes ENSG00000234041 Ensembl
GTEx ENSG00000234041 GTEx
Human Proteome Map AL512326.5 Human Proteome Map