AC073063.1 (cytokine induced protein 29 kDa (CIP29) pseudogene) - Rat Genome Database

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Gene: AC073063.1 (cytokine induced protein 29 kDa (CIP29) pseudogene) Homo sapiens
Analyze
Symbol: AC073063.1
Name: cytokine induced protein 29 kDa (CIP29) pseudogene
RGD ID: 16554068
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl799,442,890 - 99,443,496 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:350
Count of miRNA genes:291
Interacting mature miRNAs:298
Transcripts:ENST00000398089, ENST00000434352
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 8 3 2 48 2 19 12 58 1
Low 2216 1805 1387 349 1141 222 3770 1671 2643 373 1317 1481 139 1033 2449 3
Below cutoff 198 942 315 252 537 222 536 498 1011 32 64 110 30 166 326 1

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000434352
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl799,442,890 - 99,443,496 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC073063.1 COSMIC
Ensembl Genes ENSG00000228335 Ensembl
GTEx ENSG00000228335 GTEx
Human Proteome Map AC073063.1 Human Proteome Map