AL139095.1 (ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9) (ATP5G3) pseudogene) - Rat Genome Database

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Gene: AL139095.1 (ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9) (ATP5G3) pseudogene) Homo sapiens
Analyze
Symbol: AL139095.1
Name: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9) (ATP5G3) pseudogene
RGD ID: 16552385
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl67,331,286 - 7,331,676 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:62
Count of miRNA genes:60
Interacting mature miRNAs:61
Transcripts:ENST00000404326
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 6 6 6 4 7 9 1 2 44 37 1 1
Below cutoff 73 98 66 33 37 22 237 86 83 24 255 80 15 39 116 1

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000404326
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl67,331,286 - 7,331,676 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL139095.1 COSMIC
Ensembl Genes ENSG00000219375 Ensembl
GTEx ENSG00000219375 GTEx
Human Proteome Map AL139095.1 Human Proteome Map