AL355497.1 (pseudogene similar to UL16 binding protein 1 ULBP16) - Rat Genome Database

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Gene: AL355497.1 (pseudogene similar to UL16 binding protein 1 ULBP16) Homo sapiens
Analyze
Symbol: AL355497.1
Name: pseudogene similar to UL16 binding protein 1 ULBP16
RGD ID: 16552381
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl6149,977,471 - 149,979,105 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:266
Count of miRNA genes:256
Interacting mature miRNAs:264
Transcripts:ENST00000406262
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 3 1 16 6 11 144 1 33 25
Below cutoff 80 78 69 17 88 15 174 72 396 14 300 303 3 34 89 1

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000406262
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl6149,977,471 - 149,979,105 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL355497.1 COSMIC
Ensembl Genes ENSG00000219298 Ensembl
GTEx ENSG00000219298 GTEx
Human Proteome Map AL355497.1 Human Proteome Map