Z98755.1 (ClpX caseinolytic protease X homolog (E. coli) (CLPX) pseudogene) - Rat Genome Database

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Gene: Z98755.1 (ClpX caseinolytic protease X homolog (E. coli) (CLPX) pseudogene) Homo sapiens
Analyze
Symbol: Z98755.1
Name: ClpX caseinolytic protease X homolog (E. coli) (CLPX) pseudogene
RGD ID: 16552277
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl6103,002,514 - 103,003,897 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:149
Count of miRNA genes:145
Interacting mature miRNAs:147
Transcripts:ENST00000407015
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1 1 3
Low 93 8 33 18 184 22 214 52 84 46 101 195 8 2 3
Below cutoff 63 14 56 23 38 23 88 16 45 69 316 88 5 16 1

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000407015
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl6103,002,514 - 103,003,897 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC Z98755.1 COSMIC
Ensembl Genes ENSG00000217120 Ensembl
GTEx ENSG00000217120 GTEx
Human Proteome Map Z98755.1 Human Proteome Map