AL139039.1 (glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase) (GCNT1) pseudogene) - Rat Genome Database

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Gene: AL139039.1 (glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase) (GCNT1) pseudogene) Homo sapiens
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Symbol: AL139039.1
Name: glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase) (GCNT1) pseudogene
RGD ID: 16552236
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) pseudogene; LOC100422564
Related Functional Gene: GCNT2  
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38610,514,185 - 10,514,946 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl610,514,282 - 10,514,973 (+)EnsemblGRCh38hg38GRCh38
GRCh37610,514,418 - 10,515,179 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map6p24.3NCBI
HuRef610,390,148 - 10,390,909 (+)NCBIHuRef
CHM1_1610,516,560 - 10,517,321 (+)NCBICHM1_1
T2T-CHM13v2.0610,381,894 - 10,382,655 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model




.

Predicted Target Of
Summary Value
Count of predictions:55
Count of miRNA genes:54
Interacting mature miRNAs:54
Transcripts:ENST00000401900
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
82 177 165 214 327 195 381 45 82 21 280 617 488 6 113 186 637 281 29



Ensembl Acc Id: ENST00000401900
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl610,514,282 - 10,514,973 (+)Ensembl


Database
Acc Id
Source(s)
COSMIC AL139039.1 COSMIC
Ensembl Genes ENSG00000216359 Ensembl, ENTREZGENE
GTEx ENSG00000216359 GTEx
Human Proteome Map AL139039.1 Human Proteome Map
NCBI Gene LOC100422564 ENTREZGENE


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-06-25 AL139039.1  glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase) (GCNT1) pseudogene  LOC100422564  glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) pseudogene  Symbol and/or name change 19259462 PROVISIONAL
2020-06-18 LOC100422564  glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) pseudogene  AL139039.1  glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase) (GCNT1) pseudogene  Symbol and/or name change 5135510 APPROVED