AL031679.1 (FUS interacting protein (serine/arginine-rich) 1 (FUSIP1) pseudogene) - Rat Genome Database

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Gene: AL031679.1 (FUS interacting protein (serine/arginine-rich) 1 (FUSIP1) pseudogene) Homo sapiens
Analyze
Symbol: AL031679.1
Name: FUS interacting protein (serine/arginine-rich) 1 (FUSIP1) pseudogene
RGD ID: 16552214
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl207,831,798 - 7,832,322 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:104
Count of miRNA genes:101
Interacting mature miRNAs:102
Transcripts:ENST00000400616
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 1 1 14 13 5 13 2 5 3 10 6 2
Below cutoff 98 105 171 102 38 94 183 85 105 57 266 108 8 36 110

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000400616
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl207,831,798 - 7,832,322 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL031679.1 COSMIC
Ensembl Genes ENSG00000215586 Ensembl
GTEx ENSG00000215586 GTEx
Human Proteome Map AL031679.1 Human Proteome Map