AL160271.1 (null) - Rat Genome Database

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Gene: AL160271.1 (null) Homo sapiens
Analyze
Symbol: AL160271.1
Name:
RGD ID: 16551890
Description:
Type: snorna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl9131,782,860 - 131,782,958 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:110
Count of miRNA genes:107
Interacting mature miRNAs:109
Transcripts:ENST00000391093
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium
Low 3 1 1 7 1 3 5 3 4 4
Below cutoff 4 6 1 1 3 4 9 6 3 3

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000391093
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl9131,782,860 - 131,782,958 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL160271.1 COSMIC
Ensembl Genes ENSG00000212395 Ensembl
GTEx ENSG00000212395 GTEx
Human Proteome Map AL160271.1 Human Proteome Map