Y_RNA (Y RNA) - Rat Genome Database

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Gene: Y_RNA (Y RNA) Homo sapiens
Analyze
Symbol: Y_RNA
Name: Y RNA
RGD ID: 16551674
Description:
Type: misc_rna
Previously known as: AC073912.1
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl12130,906,838 - 130,906,949 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:182
Count of miRNA genes:178
Interacting mature miRNAs:181
Transcripts:ENST00000384123
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system adipose tissue appendage
High
Medium
Low 2 4 2 5 1
Below cutoff 3 4 2 5 6 1 10 4 2 3 4

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000384123
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12130,906,838 - 130,906,949 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC Y_RNA COSMIC
Ensembl Genes ENSG00000206850 Ensembl
GTEx ENSG00000206850 GTEx
Human Proteome Map Y_RNA Human Proteome Map


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-08-20 Y_RNA  Y RNA  AC073912.1    Symbol and/or name change 19259462 PROVISIONAL
2020-02-07 AC073912.1    Y_RNA  Y RNA  Symbol and/or name change 19259462 PROVISIONAL