AL591503.1 (novel transcript) - Rat Genome Database

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Gene: AL591503.1 (novel transcript) Homo sapiens
Analyze
Symbol: AL591503.1
Name: novel transcript
RGD ID: 16551507
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 EnsemblX47,297,852 - 47,298,721 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:87
Count of miRNA genes:86
Interacting mature miRNAs:86
Transcripts:ENST00000366224
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1 1 3 8
Low 128 10 51 29 210 34 257 58 101 73 132 239 8 1 4
Below cutoff 139 145 189 53 102 41 248 89 325 85 179 166 11 70 149

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000366224
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblX47,297,852 - 47,298,721 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL591503.1 COSMIC
Ensembl Genes ENSG00000203402 Ensembl
GTEx ENSG00000203402 GTEx
Human Proteome Map AL591503.1 Human Proteome Map