Mir743 (microRNA 743) - Rat Genome Database

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Gene: Mir743 (microRNA 743) Mus musculus
Analyze
Symbol: Mir743
Name: microRNA 743
RGD ID: 1625895
MGI Page MGI
Description: Acts upstream of or within female sex differentiation.
Type: ncrna (Ensembl: miRNA)
RefSeq Status: PROVISIONAL
Previously known as: mir-743a; Mirn; Mirn743; mmu-mir-7; mmu-mir-743
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X65,820,363 - 65,820,424 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX65,820,363 - 65,820,424 (-)EnsemblGRCm39 Ensembl
GRCm38X66,776,757 - 66,776,818 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX66,776,757 - 66,776,818 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X64,029,932 - 64,029,993 (-)NCBIGRCm37MGSCv37mm9NCBIm37
CeleraX54,995,007 - 54,995,068 (+)NCBICelera
Cytogenetic MapXA7.1NCBI
cM MapX34.81NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References
Additional References at PubMed
PMID:16381832   PMID:16766679   PMID:17604727   PMID:20215419   PMID:20413612   PMID:21037258   PMID:21267068   PMID:21822254   PMID:23946534   PMID:26107383   PMID:27667021   PMID:32493902  


Genomics

miRNA Target Status

Predicted Targets
Summary Value
Count of predictions:26888
Count of gene targets:10056
Count of transcripts:16466
Interacting mature miRNAs:mmu-miR-743a-3p, mmu-miR-743a-5p
Prediction methods:Microtar, Miranda, Pita, Pita,Targetscan, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
13208567Bmiq12_mbody mass index QTL 12 (mouse)X3526365377043606Mouse
1301009Pbwg7_mpostnatal body weight growth 7 (mouse)Not determinedX3911371473113814Mouse
4141565Pbwg21_mpostnatal body weight growth 21 (mouse)Not determinedX3911371473113814Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX3992149886260137Mouse
4142200Rtwq1_mreduced testis weight QTL 1 (mouse)Not determined4147706075477203Mouse
1301278Bdln1_mbody length 1 (mouse)Not determinedX4170210675702218Mouse
1300702Fcsa4_mfemoral cross-sectional area 4 (mouse)Not determinedX4602744480027567Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
1301351Obq6_mobesity QTL 6 (mouse)Not determinedX5077237570434751Mouse
25314311Syncl3_msynaptonemal complex length 3 (mouse)X5198887789743606Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
10412108Desp5_mdespair 5 (mouse)Not determinedX5472235188722351Mouse
13464140Hdlq108_mHDL QTL 108 (mouse)X5777196091771960Mouse
12880401Emlq3_memotional learning QTL 3 (mouse)X5799218370090431Mouse
25314316Mlh1fc3_mMLH1 foci count 3 (mouse)X6134360689843606Mouse
12050071Hstx2_mhybrid sterility, X chromosome 2 (mouse)X6392424768624700Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000103939
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX65,820,363 - 65,820,424 (-)Ensembl
GRCm38.p6 EnsemblX66,776,757 - 66,776,818 (-)Ensembl
RefSeq Acc Id: NR_030532
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X65,820,363 - 65,820,424 (-)NCBI
GRCm38X66,776,757 - 66,776,818 (-)ENTREZGENE
MGSCv37X64,029,932 - 64,029,993 (-)RGD
CeleraX54,995,007 - 54,995,068 (+)RGD
cM MapX ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000077127 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000103939 ENTREZGENE
MGD MGI:3709841 ENTREZGENE
miRBase MI0005207 ENTREZGENE
NCBI Gene 100049546 ENTREZGENE
PhenoGen Mir743 PhenoGen
RNAcentral URS000013BFCF RNACentral
  URS00003ABBF3 RNACentral
  URS000075DEEC RNACentral