Or5h24 (olfactory receptor family 5 subfamily H member 24, pseudogene 1) - Rat Genome Database

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Gene: Or5h24 (olfactory receptor family 5 subfamily H member 24, pseudogene 1) Mus musculus
Analyze
Symbol: Or5h24
Name: olfactory receptor family 5 subfamily H member 24, pseudogene 1
RGD ID: 1623648
MGI Page MGI
Description: Predicted to enable olfactory receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and sensory perception of smell. Predicted to be located in membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: GA_x54KRFPKG5P-55327126-55326203; MOR183-1; MOR183-11_p; olfactory receptor 192; olfactory receptor family 5 subfamily H member 24; Olfr192
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
NCBI Annotation Information: Note: Genetic polymorphisms result in both protein coding and non-coding alleles of this gene.
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391658,918,429 - 58,922,216 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1658,918,344 - 58,922,216 (-)EnsemblGRCm39 Ensembl
GRCm381659,098,066 - 59,101,853 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1659,097,981 - 59,101,853 (-)EnsemblGRCm38mm10GRCm38
MGSCv371659,097,892 - 59,098,816 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361659,040,322 - 59,041,246 (-)NCBIMGSCv36mm8
Celera1659,447,592 - 59,448,515 (-)NCBICelera
Cytogenetic Map16C1.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (ISA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:14611657   PMID:15081110  


Genomics

Variants

.
Variants in Or5h24
131 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:12
Count of miRNA genes:12
Interacting mature miRNAs:12
Transcripts:ENSMUST00000080251
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11059560Lmr12b_mleishmaniasis resistance 12b (mouse)162879281362792952Mouse
1300915Lmr12_mleishmaniasis resistance 12 (mouse)Not determined162879281362792952Mouse
1301138Pcd4ts3_mp-glycoprotein positive CD4 T cell subset 3 (mouse)Not determined164059392374594076Mouse
1301394Eae11_msusceptibility to experimental allergic encephalomyelitis 11 (mouse)Not determined165356189187562035Mouse
26884376Skwq4_mskull length QTL 4, 5 week (mouse)16841786490896888Mouse
1302096Aod1a_mautoimmune ovarian dysgenesis 1a (mouse)Not determined163544664392573008Mouse
4141212Imraq3_mimmune response to AAV2 QTL 3 (mouse)Not determined164438335078383506Mouse
1558836Dice1b_mdetermination of interleukin 4 commitment 1b (mouse)Not determined164551100072274485Mouse
1301719Remslp3_mrapid eye movement sleep 3 (mouse)Not determined164438335078383506Mouse
1357778Diobq_mdiet-induced obesity QTL (mouse)Not determined164219781782331174Mouse
1301364Lith14_mlithogenic gene 14 (mouse)Not determined165566184689661961Mouse
26884432Zlq7_mzygomatic length QTL 7, 10 week (mouse)16381786464620363Mouse
11049571Lmr12c_mleishmaniasis resistance 12c (mouse)162879281362792952Mouse
11059559Lmr12a_mleishmaniasis resistance 12a (mouse)162879281362792952Mouse
4142187Arrd3_mage-related retinal degeneration 3 (mouse)Not determined3252290965466552Mouse
11522747Eae41_mexperimental allergic encephalomyelitis susceptibility 41 (mouse)164039913478015472Mouse
14928310Manh80_mmandible shape 80 (mouse)164821984182219841Mouse
1357763Lp1_mlymphocyte proliferation 1 (mouse)Not determined16654297965466552Mouse
1357517Bwtn1_mbody weight at necropsy 1 (mouse)Not determined162001932985600826Mouse
26884416Bzwq5_mbi-zygomatic width QTL 5, 5 week (mouse)163732036284696888Mouse
1301070Cypr1_mcytokine production 1 (mouse)Not determined163231279566312933Mouse
27226785Feml12_mfemur length 12, 5 week (mouse)16331786464620363Mouse
4142112Skts-fp3_mskin tumor susceptibility in FVB and PWK 3 (mouse)Not determined164005388172924385Mouse

Markers in Region
UniSTS:485252  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381659,098,066 - 59,098,990UniSTSGRCm38
MGSCv371659,097,892 - 59,098,816UniSTSGRCm37
Celera1659,447,592 - 59,448,515UniSTS
Cytogenetic Map16C1.3UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000205727   ⟹   ENSMUSP00000145656
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1658,918,344 - 58,922,216 (-)Ensembl
GRCm38.p6 Ensembl1659,097,981 - 59,101,853 (-)Ensembl
Ensembl Acc Id: ENSMUST00000206214   ⟹   ENSMUSP00000145941
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1658,918,344 - 58,919,870 (-)Ensembl
GRCm38.p6 Ensembl1659,097,981 - 59,099,507 (-)Ensembl
RefSeq Acc Id: NR_157091
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391658,918,429 - 58,922,216 (-)NCBI
GRCm381659,098,066 - 59,101,853 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_997432 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAP70780 (Get FASTA)   NCBI Sequence Viewer  
  EDK98206 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Acc Id: ENSMUSP00000145941   ⟸   ENSMUST00000206214
Ensembl Acc Id: ENSMUSP00000145656   ⟸   ENSMUST00000205727
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000108464 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000205727 ENTREZGENE
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro 7TM_GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_supfam UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
  Olfactory_GPCR UniProtKB/TrEMBL
KEGG Report mmu:404309 UniProtKB/TrEMBL
MGD MGI:3030026 ENTREZGENE
NCBI Gene 404309 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR-RELATED UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PhenoGen Or5h24 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt Q7TS44 ENTREZGENE, UniProtKB/TrEMBL
  Q7TS46 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-05-30 Or5h24  olfactory receptor family 5 subfamily H member 24, pseudogene 1  Olfr192  olfactory receptor 192  Symbol and/or name updated 27372883 PROVISIONAL