Krtap13-24 (keratin associated protein 13-24) - Rat Genome Database

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Gene: Krtap13-24 (keratin associated protein 13-24) Mus musculus
Analyze
No known orthologs.
Symbol: Krtap13-24
Name: keratin associated protein 13-24
RGD ID: 1622667
MGI Page MGI
Description: Orthologous to human KRTAP13-3 (keratin associated protein 13-3).
Type: pseudo (Ensembl: protein-coding)
RefSeq Status: PROVISIONAL
Previously known as: EG433047; Gm20741
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Related Functional Gene: Krtap13-21  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391688,608,328 - 88,609,108 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1688,608,328 - 88,609,108 (-)EnsemblGRCm39 Ensembl
GRCm381688,811,440 - 88,812,220 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1688,811,440 - 88,812,220 (-)EnsemblGRCm38mm10GRCm38
MGSCv371688,811,933 - 88,812,427 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361688,700,299 - 88,701,079 (-)NCBIMGSCv36mm8
Celera1689,014,682 - 89,015,462 (-)NCBICelera
Cytogenetic Map16C3.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:12477932  


Genomics

Variants

.
Variants in Krtap13-24
39 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302194Pgia10_mproteoglycan induced arthritis 10 (mouse)Not determined166860072298008968Mouse
26884376Skwq4_mskull length QTL 4, 5 week (mouse)16841786490896888Mouse
1302096Aod1a_mautoimmune ovarian dysgenesis 1a (mouse)Not determined163544664392573008Mouse
1558740Bpq9_mblood pressure QTL 9 (mouse)Not determined166332733697327472Mouse
4141113Tgq28_mtriglyceride QTL 28 (mouse)Not determined6298664696986646Mouse
1301364Lith14_mlithogenic gene 14 (mouse)Not determined165566184689661961Mouse
4142262Lmr18_mleishmaniasis resistance 18 (mouse)Not determined166912761198008968Mouse
11049573Lmr18b_mleishmaniasis resistance 18b (mouse)166912761198008968Mouse
1301598Renf2_mrenal failure 2 (mouse)Not determined167038025298008968Mouse
11049574Lmr18a_mleishmaniasis resistance 18a (mouse)166912761198008968Mouse
11522753Cocia19_mcocaine-induced activity, QTL 19 (mouse)166925448298008968Mouse
1300928Etia_methanol induced activation (mouse)Not determined166331390797314016Mouse
1301125Sluc27_msusceptibility to lung cancer 27 (mouse)Not determined166160864495608764Mouse
1301032Tauph_mtau phosphorylation (mouse)Not determined166907613298008968Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000232664   ⟹   ENSMUSP00000156212
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1688,608,328 - 88,609,108 (-)Ensembl
GRCm38.p6 Ensembl1688,811,440 - 88,812,220 (-)Ensembl
RefSeq Acc Id: NR_045150
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391688,608,328 - 88,609,108 (-)NCBI
GRCm381688,811,440 - 88,812,220 (-)ENTREZGENE
Celera1689,014,682 - 89,015,462 (-)ENTREZGENE
cM Map16 ENTREZGENE
Sequence:
Protein Sequences
Ensembl Protein ENSMUSP00000156212.2
Ensembl Acc Id: ENSMUSP00000156212   ⟸   ENSMUST00000232664

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A338P708-F1-model_v2 AlphaFold A0A338P708 1-164 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:5434097 AgrOrtholog
Ensembl Genes ENSMUSG00000116636 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000232664 ENTREZGENE
  ENSMUST00000232664.2 UniProtKB/TrEMBL
InterPro KRTAP_PMG UniProtKB/TrEMBL
MGD MGI:5434097 ENTREZGENE
NCBI Gene 433047 ENTREZGENE
Pfam PMG UniProtKB/TrEMBL
PhenoGen Krtap13-24 PhenoGen
UniProt A0A338P708_MOUSE UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-02-26 Krtap13-24  keratin associated protein 13-24  Gm20741  predicted gene, 20741  Symbol and/or name updated 27372883 PROVISIONAL
2013-02-06 Gm20741  predicted gene, 20741  LOC433047  keratin associated protein pseudogene  Symbol and/or name change 5135510 APPROVED
2011-07-27 LOC433047  keratin associated protein pseudogene  EG433047  predicted gene, EG433047  Symbol and/or name change 5135510 APPROVED