Gm8492 (predicted gene 8492) - Rat Genome Database

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Gene: Gm8492 (predicted gene 8492) Mus musculus
Analyze
Symbol: Gm8492
Name: predicted gene 8492
RGD ID: 1621693
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EG667170
Related Functional Gene: Gapdh  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39179,539,028 - 9,540,229 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl179,539,227 - 9,540,213 (-)EnsemblGRCm39 Ensembl
GRCm38179,320,196 - 9,321,397 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl179,320,395 - 9,321,381 (-)EnsemblGRCm38mm10GRCm38
MGSCv37179,513,064 - 9,514,296 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36179,158,569 - 9,426,449 (-)NCBIMGSCv36mm8
Celera179,369,520 - 9,370,752 (-)NCBICelera
Cytogenetic Map17A1NCBI
cM Map176.83NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm8492
31 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:179
Count of miRNA genes:163
Interacting mature miRNAs:172
Transcripts:ENSMUST00000182375
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17858491442585149Mouse
12910982Pifs2_mpeptide-induced fatal syndrome 2 (mouse)17126189355Mouse
12910528Nrq1_mnoise-induced hearing loss resistant QTL 1 (mouse)17129198453Mouse
1357680Idd23_minsulin dependent diabetes susceptibility 23 (mouse)Not determined17397489026401133Mouse
1302196Myaa1_mmodifier of Yaa 1 (mouse)Not determined17120975022Mouse
1302100Circp2_mcircadian photosensitivity 2 (mouse)Not determined17129198453Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
13824987Flal1_mfatty liver accumulation QTL 1, females only (mouse)17821883211218887Mouse
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse
1300613Pcyts4_mplasmacytoma susceptibility 4 (mouse)Not determined17127081639Mouse
4141608Phl1_mprogressive hearing loss 1 (mouse)Not determined17787584329487423Mouse
1357452Vtbt18_mvertebral trabecular bone trait 18 (mouse)Not determined17120975022Mouse
1357902Obq19_mobesity QTL 19 (mouse)Not determined17125662076Mouse
1357743Lith3_mlithogenic gene 3 (mouse)Not determined17126194456Mouse
12910527Nrq1a_mnoise-induced hearing loss resistant QTL 1a (mouse)17129198453Mouse
1301615Cfld3_mcystic fibrosis lung disease 3 (mouse)Not determined17127081639Mouse
1301327Lmr7_mleishmaniasis resistance 7 (mouse)Not determined17485475227715939Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17858491442585149Mouse
13524851Asrq8_macoustic startle response 8 (mouse)17131030170Mouse

Markers in Region
D17Jcs100  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38179,399,259 - 9,399,462UniSTSGRCm38
MGSCv37179,592,124 - 9,592,327UniSTSGRCm37
Celera179,448,460 - 9,448,663UniSTS
Cytogenetic Map17A1UniSTS
cM Map17 UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000182375
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl179,539,227 - 9,540,213 (-)Ensembl
GRCm38.p6 Ensembl179,320,395 - 9,321,381 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000097958 Ensembl, ENTREZGENE
MGD MGI:3643249 ENTREZGENE
NCBI Gene 667170 ENTREZGENE
PhenoGen Gm8492 PhenoGen