1700067K01Rik (RIKEN cDNA 1700067K01 gene) - Rat Genome Database
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Gene: 1700067K01Rik (RIKEN cDNA 1700067K01 gene) Mus musculus
Analyze
Symbol: 1700067K01Rik
Name: RIKEN cDNA 1700067K01 gene
RGD ID: 1619106
MGI Page MGI
Description: Involved in in utero embryonic development. Orthologous to human C19orf67 (chromosome 19 open reading frame 67); INTERACTS WITH bisphenol A (ortholog); sodium arsenite (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: hypothetical protein LOC73453; UPF0575 protein C19orf67 homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,727,145 - 84,731,399 (+)NCBIGRCm39mm39
GRCm38884,000,516 - 84,004,770 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl884,001,502 - 84,004,770 (+)EnsemblGRCm38mm10GRCm38
MGSCv37886,525,605 - 86,528,669 (+)NCBIGRCm37mm9NCBIm37
MGSCv36886,891,657 - 86,894,875 (+)NCBImm8
Celera888,295,023 - 88,298,103 (+)NCBICelera
Cytogenetic Map8C2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
1. RGD automated import pipeline
2. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:16141072   PMID:16141073   PMID:21267068   PMID:21677750   PMID:27996060   PMID:28185240  
PMID:29539633  


Genomics

Comparative Map Data
1700067K01Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,727,145 - 84,731,399 (+)NCBIGRCm39mm39
GRCm38884,000,516 - 84,004,770 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl884,001,502 - 84,004,770 (+)EnsemblGRCm38mm10GRCm38
MGSCv37886,525,605 - 86,528,669 (+)NCBIGRCm37mm9NCBIm37
MGSCv36886,891,657 - 86,894,875 (+)NCBImm8
Celera888,295,023 - 88,298,103 (+)NCBICelera
Cytogenetic Map8C2NCBI
C19orf67
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1914,081,624 - 14,085,875 (-)EnsemblGRCh38hg38GRCh38
GRCh381914,080,642 - 14,086,153 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371914,192,444 - 14,196,607 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361914,052,952 - 14,057,439 (-)NCBINCBI36hg18NCBI36
Celera1914,085,754 - 14,090,241 (-)NCBI
Cytogenetic Map19p13.12NCBI
HuRef1913,764,099 - 13,768,262 (-)NCBIHuRef
CHM1_11914,193,014 - 14,197,177 (-)NCBICHM1_1
LOC686013
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01925,122,870 - 25,126,960 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1925,123,724 - 25,127,145 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01936,100,780 - 36,103,979 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41925,832,898 - 25,835,839 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1923,694,648 - 23,699,266 (-)NCBICelera
Cytogenetic Map19q11NCBI
LOC102010998
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541532,785,649 - 32,788,706 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541532,785,472 - 32,789,328 (-)NCBIChiLan1.0ChiLan1.0
C19H19orf67
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11914,374,098 - 14,378,137 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1914,374,098 - 14,378,134 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01913,646,905 - 13,651,425 (-)NCBIMhudiblu_PPA_v0panPan3
C20H19orf67
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2048,432,244 - 48,435,273 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12048,431,736 - 48,435,274 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CUNH19orf67
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366592,740,595 - 2,743,490 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
C2H19orf67
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl265,100,572 - 65,104,195 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1265,100,933 - 65,103,997 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2265,374,485 - 65,378,332 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CUNH19orf67
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl612,723,991 - 12,733,051 (-)Ensembl
ChlSab1.1612,723,781 - 12,733,587 (-)NCBI
CUNH19orf67
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046249011,310,671 - 1,314,361 (-)NCBI

Position Markers
RH124985  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38883,999,833 - 84,000,153UniSTSGRCm38
MGSCv37886,523,732 - 86,524,052UniSTSGRCm37
Celera888,293,151 - 88,293,471UniSTS
Cytogenetic Map8C3UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined870305375104305495Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined870305375104305495Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871102903105103009Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7113678390202598Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71287817123895615Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871287817123895615Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined871396181105396393Mouse
1300920Pitm3_mprion incubation time 3 (mouse)Not determined873202495107202598Mouse
27095912Pglq14_mpelvic girdle length QTL 14, 16 week (mouse)873400000126100000Mouse
1558890Lith18_mlithogenic gene 18 (mouse)Not determined875675517109675623Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined875685348109685497Mouse
1301808Nhdlq1_mnon-HDL QTL 1 (mouse)Not determined875685348109685497Mouse
1301874Hdlq16_mHDL QTL 16 (mouse)Not determined875685348109685497Mouse
10412234Nhdlq14_mnon-HDL QTL 14 (mouse)Not determined875685348109685497Mouse
1301099Cbm2_mcerebellum weight 2 (mouse)Not determined878518613112518703Mouse
1301581Char2_mP. chabaudi malaria resistance QTL 2 (mouse)Not determined879082178113082403Mouse
12904012Cfq10_mconditioned fear QTL 10 (mouse)88006677589014359Mouse
10755530Wbc2_mwhite blood cell count 2 (mouse)881092664115092664Mouse
10755519Wbc1_mwhite blood cell count 1 (mouse)881619151115619151Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1278
Count of miRNA genes:517
Interacting mature miRNAs:586
Transcripts:ENSMUST00000060357, ENSMUST00000140120, ENSMUST00000172548, ENSMUST00000174570, ENSMUST00000174587
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000060357   ⟹   ENSMUSP00000062468
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl884,001,502 - 84,004,770 (+)Ensembl
RefSeq Acc Id: ENSMUST00000140120
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl884,002,329 - 84,003,289 (+)Ensembl
RefSeq Acc Id: ENSMUST00000174570   ⟹   ENSMUSP00000134486
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl884,001,577 - 84,004,664 (+)Ensembl
RefSeq Acc Id: ENSMUST00000239176   ⟹   ENSMUSP00000159263
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl884,001,577 - 84,004,670 (+)Ensembl
RefSeq Acc Id: NM_183097   ⟹   NP_898920
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,728,092 - 84,731,398 (+)NCBI
GRCm38884,001,463 - 84,004,769 (+)NCBI
MGSCv37886,525,605 - 86,528,669 (+)RGD
Celera888,295,023 - 88,298,103 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006531403   ⟹   XP_006531466
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,727,145 - 84,731,399 (+)NCBI
GRCm38884,000,516 - 84,004,770 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_898920   ⟸   NM_183097
- Sequence:
RefSeq Acc Id: XP_006531466   ⟸   XM_006531403
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSMUSP00000159263   ⟸   ENSMUST00000239176
RefSeq Acc Id: ENSMUSP00000134486   ⟸   ENSMUST00000174570
RefSeq Acc Id: ENSMUSP00000062468   ⟸   ENSMUST00000060357

Promoters
RGD ID:6842485
Promoter ID:MM_KWN:55040
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_4Hour,   ES_Cell,   MEF_B6
Transcripts:ENSMUST00000060357,   NM_183097,   OTTMUST00000071647
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36886,524,701 - 86,526,822 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1920703 AgrOrtholog
Ensembl Genes ENSMUSG00000046408 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000062468 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000134486 UniProtKB/TrEMBL
  ENSMUSP00000159263 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000060357 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000174570 UniProtKB/TrEMBL
  ENSMUST00000239176 ENTREZGENE, UniProtKB/TrEMBL
InterPro DUF3314 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:73453 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1920703 ENTREZGENE
NCBI Gene 73453 ENTREZGENE
PANTHER PTHR36292 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF3314 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen 1700067K01Rik PhenoGen
UniGene Mm.491533 ENTREZGENE
  Mm.75101 ENTREZGENE
UniProt A0A668KLB1_MOUSE UniProtKB/TrEMBL
  A0A6E0D3Q4_MOUSE UniProtKB/TrEMBL
  B2RVM9_MOUSE UniProtKB/TrEMBL
  B7ZWF8_MOUSE UniProtKB/TrEMBL
  CS067_MOUSE UniProtKB/Swiss-Prot
  G3UZG4_MOUSE UniProtKB/TrEMBL
  Q8CF25 ENTREZGENE
UniProt Secondary F6UZF9 UniProtKB/Swiss-Prot