Vmn2r15 (vomeronasal 2, receptor 15) - Rat Genome Database

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Gene: Vmn2r15 (vomeronasal 2, receptor 15) Mus musculus
Analyze
No known orthologs.
Symbol: Vmn2r15
Name: vomeronasal 2, receptor 15
RGD ID: 1619023
MGI Page MGI
Description: Predicted to enable G protein-coupled receptor activity. Predicted to be active in plasma membrane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: EG211223; vomeronasal receptor Vmn2r15
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395109,434,135 - 109,445,422 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5109,433,536 - 109,445,510 (-)EnsemblGRCm39 Ensembl
GRCm385109,286,269 - 109,297,556 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5109,285,670 - 109,297,644 (-)EnsemblGRCm38mm10GRCm38
MGSCv375109,715,288 - 109,726,575 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365109,526,571 - 109,537,858 (-)NCBIMGSCv36mm8
Celera5106,393,861 - 106,405,122 (-)NCBICelera
Cytogenetic Map5FNCBI
cM Map553.24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Vmn2r15Mouseepoxiconazole affects expressionEXP 6480464epoxiconazole affects the expression of VMN2R15 mRNACTDPMID:35436446
Vmn2r15MouseErionite decreases expressionEXP 6480464erionite results in decreased expression of VMN2R15 mRNACTDPMID:29279043
Vmn2r15Mousetremolite asbestos decreases expressionEXP 6480464tremolite results in decreased expression of VMN2R15 mRNACTDPMID:29279043


Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Vmn2r15Mouseplasma membrane is_active_inIBAPANTHER:PTN002373557 more ...2290270 GO_CentralGO_REF:0000033

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Vmn2r15MouseG protein-coupled receptor activity enablesIBAPANTHER:PTN002373557 more ...2290270 GO_CentralGO_REF:0000033

PMID:17382427   PMID:21873635  



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Variants in Vmn2r15
604 total Variants

Predicted Target Of
Summary Value
Count of predictions:31
Count of miRNA genes:31
Interacting mature miRNAs:31
Transcripts:ENSMUST00000167133
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 66 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
10045978Tir10_mtrypanosome infection response 10 (mouse)Not determined598019649114021986Mouse
1301399Cpfd3_mcerebellum pattern fissures (mouse)Not determined587386871121387065Mouse
25314310Syncl4_msynaptonemal complex length 4 (mouse)5103047866115538059Mouse
1301524Lmb2_mlupus in MRL and B6 F2 cross (mouse)Not determined537581488112465722Mouse
25314315Mlh1fc4_mMLH1 foci count 4 (mouse)574460661132528839Mouse
1357725Eae39_mexperimental allergic encephalomyelitis 39 (mouse)Not determined589418876118864028Mouse
14746986Manh58_mmandible shape 58 (mouse)5102446283136446283Mouse
25314317Sccor3_msynaptonemal complex length to mean MLH1 count ratio 3 (mouse)5104347866114738061Mouse
1300993Hycdc_mhypercapnic duty cycle (mouse)Not determined590561006124561151Mouse
1301126Bwem1_mbody weight day 30 males 1 (mouse)Not determined587386871121387065Mouse

1 to 10 of 66 rows






Ensembl Acc Id: ENSMUST00000167133   ⟹   ENSMUSP00000128333
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5109,433,536 - 109,445,510 (-)Ensembl
GRCm38.p6 Ensembl5109,285,670 - 109,297,644 (-)Ensembl
Ensembl Acc Id: ENSMUST00000232771   ⟹   ENSMUSP00000156715
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5109,433,536 - 109,445,510 (-)Ensembl
GRCm38.p6 Ensembl5109,285,670 - 109,297,644 (-)Ensembl
Ensembl Acc Id: ENSMUST00000232780   ⟹   ENSMUSP00000156445
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5109,433,536 - 109,445,510 (-)Ensembl
GRCm38.p6 Ensembl5109,285,670 - 109,297,644 (-)Ensembl
Ensembl Acc Id: ENSMUST00000233141   ⟹   ENSMUSP00000156713
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5109,433,536 - 109,445,510 (-)Ensembl
GRCm38.p6 Ensembl5109,285,670 - 109,297,644 (-)Ensembl
Ensembl Acc Id: ENSMUST00000233282   ⟹   ENSMUSP00000156797
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5109,433,536 - 109,445,510 (-)Ensembl
GRCm38.p6 Ensembl5109,285,670 - 109,297,644 (-)Ensembl
Ensembl Acc Id: ENSMUST00000233813   ⟹   ENSMUSP00000156417
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5109,433,536 - 109,445,510 (-)Ensembl
GRCm38.p6 Ensembl5109,285,670 - 109,297,644 (-)Ensembl
RefSeq Acc Id: NM_001104626   ⟹   NP_001098096
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395109,434,135 - 109,445,422 (-)NCBI
GRCm385109,286,269 - 109,297,556 (-)ENTREZGENE
MGSCv375109,715,288 - 109,726,575 (-)RGD
Celera5106,393,861 - 106,405,122 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_017320781   ⟹   XP_017176270
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395109,434,135 - 109,445,422 (-)NCBI
GRCm385109,286,269 - 109,297,556 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017320782   ⟹   XP_017176271
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395109,435,022 - 109,445,422 (-)NCBI
GRCm385109,287,156 - 109,297,556 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017320783   ⟹   XP_017176272
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395109,435,022 - 109,445,422 (-)NCBI
GRCm385109,287,156 - 109,297,556 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164973   ⟹   XP_036020866
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395109,434,135 - 109,445,422 (-)NCBI
Sequence:
1 to 5 of 11 rows
1 to 5 of 11 rows
RefSeq Acc Id: NP_001098096   ⟸   NM_001104626
- Peptide Label: precursor
- UniProtKB: L7N2A0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176270   ⟸   XM_017320781
- Peptide Label: isoform X1
- UniProtKB: A0A3B2WCV8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176272   ⟸   XM_017320783
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_017176271   ⟸   XM_017320782
- Peptide Label: isoform X3
- Sequence:
Ensembl Acc Id: ENSMUSP00000156713   ⟸   ENSMUST00000233141
Name Modeler Protein Id AA Range Protein Structure
AF-L7N2A0-F1-model_v2 AlphaFold L7N2A0 1-855 view protein structure



1 to 38 of 38 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000091375 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000167133 ENTREZGENE
  ENSMUST00000167133.3 UniProtKB/TrEMBL
  ENSMUST00000232771.2 UniProtKB/TrEMBL
  ENSMUST00000232780.2 UniProtKB/TrEMBL
  ENSMUST00000233141 ENTREZGENE
  ENSMUST00000233141.2 UniProtKB/TrEMBL
  ENSMUST00000233282 ENTREZGENE
  ENSMUST00000233282.2 UniProtKB/TrEMBL
  ENSMUST00000233813.2 UniProtKB/TrEMBL
Gene3D-CATH 2.10.50.30 UniProtKB/TrEMBL
  3.40.50.2300 UniProtKB/TrEMBL
InterPro ANF_lig-bd_rcpt UniProtKB/TrEMBL
  GPCR_3 UniProtKB/TrEMBL
  GPCR_3_9-Cys_dom UniProtKB/TrEMBL
  GPCR_3_9-Cys_sf UniProtKB/TrEMBL
  GPCR_3_C UniProtKB/TrEMBL
  GPCR_3_Ca_sens_rcpt-rel UniProtKB/TrEMBL
  GPCR_3_vmron_rcpt_2 UniProtKB/TrEMBL
  Peripla_BP_I UniProtKB/TrEMBL
KEGG Report mmu:211223 UniProtKB/TrEMBL
MGD MGI:3649165 ENTREZGENE
NCBI Gene 211223 ENTREZGENE
PANTHER PTHR24061 UniProtKB/TrEMBL
  VOMERONASAL 2, RECEPTOR 10-RELATED UniProtKB/TrEMBL
Pfam 7tm_3 UniProtKB/TrEMBL
  ANF_receptor UniProtKB/TrEMBL
  NCD3G UniProtKB/TrEMBL
PhenoGen Vmn2r15 PhenoGen
PRINTS GPCRMGR UniProtKB/TrEMBL
  VOMERONASL2R UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F3_4 UniProtKB/TrEMBL
Superfamily-SCOP SSF53822 UniProtKB/TrEMBL
UniProt A0A3B2WCA7_MOUSE UniProtKB/TrEMBL
  A0A3B2WCC6_MOUSE UniProtKB/TrEMBL
  A0A3B2WCV8 ENTREZGENE, UniProtKB/TrEMBL
  A0A3B2WD13 ENTREZGENE, UniProtKB/TrEMBL
  L7N2A0 ENTREZGENE, UniProtKB/TrEMBL
1 to 38 of 38 rows