Or2h2b-ps1 (olfactory receptor family 2 subfamily H member 2B, pseudogene 1) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Or2h2b-ps1 (olfactory receptor family 2 subfamily H member 2B, pseudogene 1) Mus musculus
Analyze
No known orthologs.
Symbol: Or2h2b-ps1
Name: olfactory receptor family 2 subfamily H member 2B, pseudogene 1
RGD ID: 1618890
MGI Page MGI
Description: Predicted to enable olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to be active in plasma membrane. Orthologous to human OR2H1 (olfactory receptor family 2 subfamily H member 1) and OR2H2 (olfactory receptor family 2 subfamily H member 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: GA_x6K02T2PSCP-1611898-1610960; MOR256-; MOR256-38; olfactory receptor 753, pseudogene 1; Olfr753-ps1; Olfr92-L
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
NCBI Annotation Information: Note: Genetic polymorphisms result in both protein coding and non-coding alleles of this gene.
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391737,480,602 - 37,481,537 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1737,479,204 - 37,496,621 (-)EnsemblGRCm39 Ensembl
GRCm381737,169,711 - 37,170,646 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1737,168,313 - 37,185,730 (-)EnsemblGRCm38mm10GRCm38
MGSCv371737,306,656 - 37,307,591 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361736,777,764 - 36,778,699 (-)NCBIMGSCv36mm8
Celera1740,593,875 - 40,594,810 (-)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1719.16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Benoxacor  (EXP)

References
Additional References at PubMed
PMID:11802173   PMID:11875048   PMID:14506126   PMID:14611657   PMID:21873635   PMID:32295537  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:91
Count of miRNA genes:66
Interacting mature miRNAs:66
Transcripts:ENSMUST00000051244, ENSMUST00000174673
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10045977Tir9_mtrypanosome infection response 9 (mouse)Not determined172787811943885114Mouse
26884379Skwq5_mskull length QTL 5, 5 week (mouse)173311897454107028Mouse
1300885Mbis4_mMycobacterium bovis-induced systemic lupus erythematosus 4 (mouse)Not determined173517581770165926Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
11075105Modc1_mmodifier of Odc1 (mouse)172771579245622654Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171506165249061760Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172781520961815209Mouse
4141357Mrdq1_mmodifier of retinal degeneration QTL 1 (mouse)Not determined3098790348039703Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171681972150819843Mouse
10755514Amzn2_manatomical modifier of Zfp423 2 (mouse)173596629469966424Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171087811944878219Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171914502553145025Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17858491442585149Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171264696146646961Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171506165249061760Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171746220851462345Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171746220851462345Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171746220851462345Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3103350065033630Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171506165249061760Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171746220851462345Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171702994351030078Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172605118560051352Mouse
12904951Smmq2_msoleus muscle mass QTL 2 (mouse)173678974370789743Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1188597145886119Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171245178746451787Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172507658355712970Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1120648439364059Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172558491443976235Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17858491442585149Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171841835752420983Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171817541252178214Mouse
1300692Blmpf1_mbleomycin-induced pulmonary fibrosis 1 (mouse)Not determined173206165237644775Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172862240662622654Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171842214152424327Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172461275058612864Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171199818445998184Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172688497260885114Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
1300602Eye2_meye weight 2 (mouse)Not determined172650533741105037Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171681972150819843Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171506165249061760Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172640101252911704Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171412337248123496Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined173013255564132666Mouse

Markers in Region
UniSTS:485098  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381737,169,727 - 37,170,646UniSTSGRCm38
GRCm381737,111,061 - 37,111,980UniSTSGRCm38
MGSCv371737,306,672 - 37,307,591UniSTSGRCm37
MGSCv371737,248,006 - 37,248,925UniSTSGRCm37
Celera1740,534,059 - 40,534,978UniSTS
Celera1740,593,891 - 40,594,810UniSTS
Cytogenetic Map17B1UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000174025   ⟹   ENSMUSP00000151256
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1737,479,204 - 37,496,621 (-)Ensembl
GRCm38.p6 Ensembl1737,168,313 - 37,185,730 (-)Ensembl
Ensembl Acc Id: ENSMUST00000174673   ⟹   ENSMUSP00000146480
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1737,480,618 - 37,481,536 (-)Ensembl
GRCm38.p6 Ensembl1737,169,727 - 37,170,645 (-)Ensembl
Ensembl Acc Id: ENSMUST00000208970   ⟹   ENSMUSP00000146407
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1737,479,204 - 37,493,509 (-)Ensembl
GRCm38.p6 Ensembl1737,168,313 - 37,182,618 (-)Ensembl
Ensembl Acc Id: ENSMUST00000219487   ⟹   ENSMUSP00000151508
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1737,479,204 - 37,493,509 (-)Ensembl
GRCm38.p6 Ensembl1737,168,313 - 37,182,618 (-)Ensembl
Protein Sequences
Protein RefSeqs NP_001416480 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Acc Id: ENSMUSP00000151508   ⟸   ENSMUST00000219487
Ensembl Acc Id: ENSMUSP00000146480   ⟸   ENSMUST00000174673
Ensembl Acc Id: ENSMUSP00000146407   ⟸   ENSMUST00000208970
Ensembl Acc Id: ENSMUSP00000151256   ⟸   ENSMUST00000174025

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A140LHN3-F1-model_v2 AlphaFold A0A140LHN3 1-164 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3030587 AgrOrtholog
Ensembl Genes ENSMUSG00000090556 Ensembl
MGD MGI:3030587 ENTREZGENE
NCBI Gene 258052 ENTREZGENE
PhenoGen Or2h2b-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-05-24 Or2h2b-ps1  olfactory receptor family 2 subfamily H member 2B, pseudogene 1  Olfr753-ps1  olfactory receptor 753, pseudogene 1  Symbol and/or name change 5135510 APPROVED