Gm7405 (predicted gene 7405) - Rat Genome Database

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Gene: Gm7405 (predicted gene 7405) Mus musculus
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Symbol: Gm7405
Name: predicted gene 7405
RGD ID: 1618589
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EG664918
Related Functional Gene: G3bp1  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X112,135,984 - 112,137,017 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX112,135,238 - 112,137,017 (-)EnsemblGRCm39 Ensembl
GRCm38X113,226,287 - 113,227,320 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX113,225,541 - 113,227,320 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X110,339,298 - 110,340,923 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X109,343,204 - 109,344,258 (-)NCBIMGSCv36mm8
CeleraX99,826,969 - 99,828,518 (-)NCBICelera
Cytogenetic MapXE1NCBI
cM MapX49.0NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm7405
16 total Variants

Predicted Target Of
Summary Value
Count of predictions:124
Count of miRNA genes:121
Interacting mature miRNAs:124
Transcripts:ENSMUST00000121476
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 9 of 9 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
13208552Wght12_mweight 12 (mouse)X94043606149782996Mouse
4141803Lmr30_mleishmaniasis resistance 30 (mouse)Not determined85062606119062720Mouse
13208556Lgth14_mbody length 14 (mouse)X94043606149782996Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
11075102Modc2_mmodifier of Odc2 (mouse)X80189914114190059Mouse
1357823Spha3_msperm head anomaly 3 (mouse)Not determinedX102055848162758941Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
4141665Mhysq2_mmale hybrid sterility QTL 2 (mouse)Not determined71453852139203212Mouse

1 to 9 of 9 rows





RefSeq Transcripts NG_028396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL671732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000121476
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX112,135,238 - 112,137,017 (-)Ensembl
GRCm38.p6 EnsemblX113,225,541 - 113,227,320 (-)Ensembl


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000081831 Ensembl
MGD MGI:3644301 ENTREZGENE
NCBI Gene 664918 ENTREZGENE
PhenoGen Gm7405 PhenoGen