Advanced Search (OLGA)

Gene: Zfp72 (zinc finger protein 72) Mus musculus

Subscribe to Updates

Analyze

Symbol:

Zfp72

Name:

zinc finger protein 72

RGD ID:

1617337

MGI Page

MGI

Description:

Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Zfp7; Zfp74; zinc finger protein 74

RGD Orthologs

Human

Bonobo

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	74,517,443 - 74,538,948 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	74,517,445 - 74,538,955 (-)	Ensembl		GRCm39 Ensembl
GRCm38	13	74,369,321 - 74,390,861 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	74,369,326 - 74,390,836 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	74,508,874 - 74,514,014 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	74,837,129 - 74,842,589 (-)	NCBI		MGSCv36	mm8
Celera	13	76,701,634 - 76,706,773 (-)	NCBI		Celera
Cytogenetic Map	13	C1	NCBI
cM Map	13	40.23	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Zfp72	Mouse	pleomorphic xanthoastrocytoma		ISO	RGD:1626257	8554872	ClinVar Annotator: match by term: Pleomorphic xanthoastrocytoma	ClinVar	PMID:28299358

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Zfp72	Mouse	(1->4)-beta-D-glucan	multiple interactions	EXP		6480464	[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of ZFP72 mRNA	CTD	PMID:36331819
Zfp72	Mouse	1,2-dimethylhydrazine	decreases expression	EXP		6480464	1,2-Dimethylhydrazine results in decreased expression of ZFP72 mRNA	CTD	PMID:22206623
Zfp72	Mouse	2,3,7,8-tetrachlorodibenzodioxine	affects expression	EXP		6480464	Tetrachlorodibenzodioxin affects the expression of ZFP72 mRNA	CTD	PMID:21570461
Zfp72	Mouse	benzo[a]pyrene	decreases methylation	ISO	RGD:1626257	6480464	Benzo(a)pyrene results in decreased methylation of ZNF735 exon	CTD	PMID:27901495
Zfp72	Mouse	epoxiconazole	increases expression	EXP		6480464	epoxiconazole results in increased expression of ZFP72 mRNA	CTD	PMID:35436446
Zfp72	Mouse	perfluorooctane-1-sulfonic acid	multiple interactions	EXP		6480464	[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of ZFP72 mRNA	CTD	PMID:36331819
Zfp72	Mouse	potassium dichromate	decreases expression	EXP		6480464	Potassium Dichromate results in decreased expression of ZFP72 mRNA	CTD	PMID:23608068
Zfp72	Mouse	sodium arsenite	decreases expression	ISO	RGD:1626257	6480464	sodium arsenite results in decreased expression of ZNF735 mRNA	CTD	PMID:25879800

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Zfp72	Mouse	regulation of transcription by RNA polymerase II	involved_in	IBA	PANTHER:PTN002354498\|FB:FBgn0004618\|UniProtKB:O95201\|UniProtKB:P17028\|MGI:2442943\|FB:FBgn0020309\|UniProtKB:O95125\|MGI:99159\|FB:FBgn0267337\|UniProtKB:Q16600\|UniProtKB:Q15697\|FB:FBgn0004880\|UniProtKB:Q9BRR0\|UniProtKB:Q9Y5A6\|MGI:1338823\|MGI:2685243\|UniProtKB:O14978	2290270		GO_Central	GO_REF:0000033

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Zfp72	Mouse	nucleus	located_in	ISO	UniProtKB:Q8TBZ5	2290270		GO_Central	GO_REF:0000119

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Zfp72	Mouse	DNA-binding transcription factor activity, RNA polymerase II-specific	enables	IBA	PANTHER:PTN002354498\|MGI:1338823\|FB:FBgn0267337\|UniProtKB:Q16600\|UniProtKB:O14978\|UniProtKB:Q9BRR0\|FB:FBgn0004618\|UniProtKB:P17028\|MGI:2442943\|UniProtKB:O95125\|MGI:99159\|UniProtKB:Q9Y5A6	2290270		GO_Central	GO_REF:0000033
Zfp72	Mouse	RNA polymerase II cis-regulatory region sequence-specific DNA binding	enables	IBA	PANTHER:PTN002354498\|MGI:1338823\|UniProtKB:Q16600\|MGI:2442943\|UniProtKB:Q9BRR0\|UniProtKB:O95125\|UniProtKB:Q9Y5A6	2290270		GO_Central	GO_REF:0000033

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:2542606	PMID:7479878	PMID:8662221	PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:15329828	PMID:16141072	PMID:16141073
PMID:21267068	PMID:21873635

Zfp72
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	74,517,443 - 74,538,948 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	74,517,445 - 74,538,955 (-)	Ensembl		GRCm39 Ensembl
GRCm38	13	74,369,321 - 74,390,861 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	74,369,326 - 74,390,836 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	74,508,874 - 74,514,014 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	74,837,129 - 74,842,589 (-)	NCBI		MGSCv36	mm8
Celera	13	76,701,634 - 76,706,773 (-)	NCBI		Celera
Cytogenetic Map	13	C1	NCBI
cM Map	13	40.23	NCBI

ZNF735
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	64,207,203 - 64,220,290 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	64,207,203 - 64,220,290 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	63,667,581 - 63,680,668 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	63,305,016 - 63,318,103 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	7	57,386,676 - 57,400,338 (+)	NCBI		Celera
Cytogenetic Map	7	q11.21	NCBI
HuRef	7	60,048,400 - 60,061,454 (+)	NCBI		HuRef
CHM1_1	7	63,762,589 - 63,775,655 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	65,415,091 - 65,428,182 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	63,005,175 - 63,018,262 (+)	NCBI

LOC100979926
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	80,087,970 - 80,129,214 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	128,415,119 - 128,458,927 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	61,249,071 - 61,290,003 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	64,567,357 - 64,577,104 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

Variants in Zfp72
809 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	60
Count of miRNA genes:	59
Interacting mature miRNAs:	60
Transcripts:	ENSMUST00000091481
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4142331	Bxs6_m	BXSB/MpJ autoimmune nephritis 6 (mouse)			Not determined			45210442	83744746	Mouse
1301593	Heal8_m	wound healing/regeneration 8 (mouse)			Not determined		13	68053999	102054119	Mouse
1300573	Elsgp2_m	elevated serum gp70 2 (mouse)			Not determined		13	50616828	84617027	Mouse
10412109	Bxs7_m	BXSB/MpJ autoimmune nephritis 7 (mouse)			Not determined		13	45210442	83744746	Mouse
10412235	Scgq5_m	spontaneous crescentic glomerulonephritis QTL 5 (mouse)			Not determined		13	36060908	96239162	Mouse
4142314	Tailaq3_m	tail length adjusted QTL 3 (mouse)			Not determined			55720354	112431103	Mouse
1558850	Sgp3_m	serum gp70 production 3 (mouse)			Not determined		13	56470456	76971314	Mouse
1301445	Listr2_m	listeriosis resistance 2 (mouse)			Not determined		13	66744601	100744746	Mouse
4141992	W6q16_m	weight 6 weeks QTL 16 (mouse)			Not determined			55720354	112431103	Mouse
4142372	Moo2_m	modifier of Odc2 (mouse)			Not determined		X	50318411	84318559	Mouse
15039353	Nmrs35_m	NAFLD-associated magnetic resonance shift 35 (mouse)					13	40588253	74588253	Mouse
10412163	Wra1_m	wheel running activity 1 (mouse)			Not determined		13	59132600	93132738	Mouse
4142241	Tailq3_m	tail length QTL 3 (mouse)			Not determined			55720354	112431103	Mouse
1300941	Skl6_m	skeletal size (tail length) 6 (mouse)			Not determined		13	64250821	98250945	Mouse
14747007	Mancz11_m	mandible centroid size 11 (mouse)					13	70111284	104111284	Mouse
4140959	W10q17_m	weight 10 weeks QTL 17 (mouse)			Not determined			55720354	112431103	Mouse
1357553	Cia28_m	collagen induced arthritis 28 (mouse)			Not determined		13	56629249	96239162	Mouse
1302073	Pgct1_m	primordial germ cell tumor locus 1 (mouse)			Not determined		13	53820783	87820897	Mouse
1301949	Skull20_m	skull morphology 20 (mouse)			Not determined		13	64250821	98250945	Mouse
1300668	Pas10_m	pulmonary adenoma susceptibility 10 (mouse)			Not determined		13	41489042	75489158	Mouse
1357563	Bmch6_m	bone mechanical trait 6 (mouse)			Not determined		13	55384980	89385140	Mouse
10402414	Sgp5_m	serum gp70 production 5 (mouse)			Not determined		13	56470456	105422186	Mouse
1301666	Eae13_m	susceptibility to experimental allergic encephalomyelitis 13 (mouse)			Not determined		13	50318411	84318559	Mouse
26884393	Humsd7_m	humerus midshaft diameter 7, 16 week (mouse)					13	3950000	76048119	Mouse
14696726	Kidrq3_m	kidney weight, right QTL 3 (mouse)					13	68217066	102217066	Mouse
4142147	Mvwf4_m	modifier of von Willebrand factor 4 (mouse)			Not determined			20477612	112898424	Mouse
14746975	Manh74_m	mandible shape 74 (mouse)					13	52477269	86477269	Mouse

RH136109

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	13	74,440,576 - 74,440,775	UniSTS	GRCm38
GRCm38	6	124,935,729 - 124,935,928	UniSTS	GRCm38
MGSCv37	13	74,578,024 - 74,578,223	UniSTS	GRCm37
MGSCv37	6	124,885,747 - 124,885,946	UniSTS	GRCm37
Celera	13	76,770,879 - 76,771,078	UniSTS
Celera	6	126,612,073 - 126,612,272	UniSTS
Cytogenetic Map	13	C1	UniSTS
Cytogenetic Map	6	F2	UniSTS

RH136519

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	13	74,440,643 - 74,440,847	UniSTS	GRCm38
GRCm38	6	124,935,796 - 124,936,000	UniSTS	GRCm38
MGSCv37	13	74,578,091 - 74,578,295	UniSTS	GRCm37
MGSCv37	6	124,885,814 - 124,886,018	UniSTS	GRCm37
Celera	13	76,770,946 - 76,771,150	UniSTS
Celera	6	126,612,140 - 126,612,344	UniSTS
Cytogenetic Map	13	C1	UniSTS
Cytogenetic Map	6	F2	UniSTS

RH126138

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	13	74,440,750 - 74,440,974	UniSTS	GRCm38
GRCm38	6	124,935,903 - 124,936,127	UniSTS	GRCm38
MGSCv37	13	74,578,198 - 74,578,422	UniSTS	GRCm37
MGSCv37	6	124,885,921 - 124,886,145	UniSTS	GRCm37
Celera	13	76,771,053 - 76,771,277	UniSTS
Celera	6	126,612,247 - 126,612,471	UniSTS
Cytogenetic Map	13	C1	UniSTS
Cytogenetic Map	6	F2	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	NM_001374038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001426443	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001426445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001426446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AK081465	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC118036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC118046	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CT009486	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U29508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000091481 ⟹ ENSMUSP00000089063

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	74,519,545 - 74,524,685 (-)	Ensembl
GRCm38.p6 Ensembl	13	74,371,426 - 74,376,566 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000223163 ⟹ ENSMUSP00000152502

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	74,517,445 - 74,538,955 (-)	Ensembl
GRCm38.p6 Ensembl	13	74,369,326 - 74,390,836 (-)	Ensembl

RefSeq Acc Id:

NM_001374038 ⟹ NP_001360967

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	13	74,517,443 - 74,538,948 (-)	NCBI
GRCm38	13	74,369,324 - 74,390,829 (-)	NCBI

Sequence:

show sequence

AGCTTTGGCATTCCTTGTGTGCACCTAGGTCGCAAGGATATTCCCTAGAGTTCGGTCCTGTGGATGTACCGTTCGCTAGTCTACAAACTTGGGTTTGGATTATTTGATCTTGAAGGTAGCTCCCAGCG
AGGAGAGAGGAGTCCTACAAGCCGGAGGCATTCTGCAGGTATGAAATATCAAAGCCTCATAATTTTCCCTCCATATGTAAAAACAATGATCTTGAGGGTTTTTCTGGATTTAAGCTGAATACCATCTC
CTTTAAGACTGTGATGAAGAAGCAGCACTACCTCCACAACTAGGTGAAAGCTAACACCAATCTTGAACCTACAAAAGGAGGTCTGGGAAAGTCTACATGATCTACATGATTGAGTCAAATATGGAAAG
AAACCCAGAGAAGGAAGAAGAAATGGCTGGTTCTAAGGGGTGGTTGTCATTCAGAGATGTGGCCATTGATTTCTCTGCAGAGGAATGTGAATGCCTGGACGCTGCTCAGTGGGATTTGTATAGCGATG
TGATGTTGGAGAATTACAGCAACCTTGTCTCTCTGGGTCTTGCTTTCTCTAAGCCCTATCTGGTCACATTTCTGGAAAAAAGACAACAGTCTTGGGATGTGAAACAACAAGCAACAGTGGCTACATAC
CCAGGAACAAAACCCTATAAATATAAAGAATGTAACAAGACCTTTGTTCGGAAGTCACTCCTTATTCAACATCAGAGAGTTCATACAGGAGAGAAACCCTACAAATGTGAACAATGTGGCAAAGCTTT
TAGCTGTTCTTCAAGCCTTACCCCACATCAAAGAATTCACACTGGAGAGAAACCCTACAAATGTGAACAGTGTGGTCAGGCTTTTAACTGTTCTTCTCACCTGTATAAGCATCAGAGAATTCACACTG
GTGAGAAACCCTATAAATGCCCAGAATGTGGCAAAGCTTTTAACTGGTCTTCAAGCCTTACCCAGCATCAAAGAATTCACAGCGGAGAGAAACCCTACAAATGTGAAGAATGTGGCTTGTCCTTTAAC
TGTTCTCACCTGTATAGGCACCAGAGAATTCACACGGGTGAAAAACTTTACAAATGCGAAGAATGTGGCAAGGCCTTCAACTGTTCTTCATATCTTAATTACCATCAGATACTTCATACTGGTGATAA
ACCCTACAAATGTAGAGAATGTGGCAAAGCCTTTACCATGGTTTCTTACCTTACTCGACACCAGAGAATTCATACTGGAGAAAAACCCTATAAATGTAAAGAATGTGACAAAGCTTTTAGCAATTGTT
CAGCACTAATTCAACACCAAAGAATTCATACTGGAGAGAAACCCTACAAATGCAGCGAATGTGGCAAAGCCTTTAATAATAGTTCAAGCCTCACTCATCACCAAAGAATTCACACTGGAGAGAAACCT
TATGAGTGCAAAGAATGTGGCAAGGCCTTTAACTCTTCTTCACACCTTAATTATCATCACAGAATTCATACTGGAGAGAAACCCTATAAATGTGAAGAATGTAGCAAAGCCTTTAATAATTTTTCAGC
CCTTATTCAACACCAAAGAATTCATACTGGAGAGAAACCCTACAAGTGTGAAAAATGTAGCAAAGCATTTAATAATTGTTCAGCTCTTAGTCAGCACCAAAGAATCCATACTGGAGAGAAACCCTATA
AGTGTGAAAAATGCGGACAGGGCTTTAACTGTTCTTCAAACCTTAAACAACACCAAAGAATTCATACTAGAGAAAAACTCTACAGCTGTGAAGATTCTGGGAAAGCCTTTAATAATGGGGAAGCCCTT
CCTCAATACCATAGAATCCATACGTACTAAATCCATATGTACTAAAGAGTAACCCTATAAATGCAGAGATGGAGGCAATGTGTTAAACAGTTATGTTATACTTTTGCAACATCAAAATTTTATATGTA
AGAGAAACCCTACAAATGAAAATATGTGTCAGATCCTTTATTCATGCCATAATCAATGAGCAGGGATTATGTATTGGTAAGAAACCTTGCAAATAGAAATAATGTTGCACAGCTTTTAACGGAAGCTT
GATCTTCACTAGCCATCAGTGAGTTCATACTAGATAGAAACTTTATACAGGTAATGACTAGGGGCAAGTTAGTCTAATATTTGTACCTCAGAAAAGCAAAATACTTAAACTACAAAACATGTAAATAA
AAAGAATATAAGCAAGTCTTTCTGCACACCTCAGATCTTACTGAATATAAGGAAATTATTATGAGACAAATCCAGTGAGTATATGGAATGTCACAAAAACTTGAGGACTTGGTTATAATTTACAGGGC
ATCATTATTTGATATAATGTAAAGAAATATCACAGACTTCAGAATCTGGCAGATAACTTATCTCTGTAAGAATATCAATGTAGTATAAAATTGAATTTACTATATAGCCTCACTTTTCAAAACTAAAT
GAAGAACAGATCTCAAATTATTATATCAAAAGAACAAAACTGGTTCTCGAGAGTTATTTTCTTCCAGAGGCCATATGTTAGATTTTGAAGTGTAGTTTTAGTAAATAAAAGTGTTTCTTAAAGTATTA
TCATTGTTGTATATTAGATGACATAATTCTATCACAAATAAAAGTTTTCCACTTTACTCAAGGAAACAGATAGCAGATTTTACTTCTATATTACTGGTGATTAGTGAAATGACTTGTCATTCTTTGAC
CAGTACTTATATTCTTCAAGTAACTTGGAAGTTACTGTTCTGTATGACACAGTTTTTTTCAAAATTTTTTAATTACTCGGAATTTTTTTGTTCCTTCCTTTTCTCTCCTTTCTCTTCTCCAAATACCT
CTGGTATAGTCCCTTCCCTCCTTACACAATTTTATGTTCTTTCTCTCTCTCTCTCCAAAAAAAAAAAAAAAACCAAAATAAAACTTGGAAGTTTTTAAAATAAAAATCACTTTTTCTAACCAACTTTC
GAAGTAAAAAACATGCGTCTAGATTAACACTCACAAGCCCTTGCCTAGACTGCACAGAAGTCATCACATAGGGAAGATATGAAGGATCCTTTAGAGAAAACTTTAACAAAGTTTTACAAGTCATTGAC
TCCAATTTAACCCAACTGACCCTGATAACAAATCTATTTACACAAACACATGAGTCTATGGGGGCCATTTCTATTCAAACTCCACATAATGTAAGGGATATTTTCATAATATATCACCCATGTGTGAT
ATATGTCACATTTTATTATTTGCTCCAGCAGAATTCAATAAAGAAGGCATCTTTCCTCTAATGTACATTTTAAAACTTTATAAAAAAATTAACAGGATGGAGAAAGGACTCATAAATGGTTAGGAATA
CTTATTGTTCTTGCAGAGGACAAAGGTTCTATTCCCAACACCCAAATTACCTGGCTCACAACCATTTGTAACTCCAGCTCAAAGGGATTTGGTCCTCTCCCTCTTATGACATAGATGGACACCAGGCA
TGCACATGGTACTCATACATACATGAAGGCAAAACACTTTAACACATAGAAATGAATCTAAAATTTCTCAATTAAGTGGCTACACTATATGGATTTATCTCTATTCCATTGGTCTACAAGTCTTTTGT
GCTGGTGCCATGGTGGTTTTATTGCTATAACTATATAAGATTATGTATTATGATACCACAAATATTGCCTTTCCACTAAGGATTTTCAAAACCTTTGTGTTCTGAATTTTAGGATTTCTTTTCTAGGT
CTATGGAAAATGTCAAATGAATTTTGATGGGGGTTACATAGAATATGTACATTATTTTGGGTGATACAGCTATTTTTACAATTAAGTCATGACATTTTTTTTCGTCACTTGACACAAGCTAGACTCTT
TGCAAAGAGGGAACATCATTTGGGAAAGTGCCTCTAACAGATTGGCGTGTAAGCAAGCCTGTGGGACATTCTTTTGGTTAATGTTGATGTTGAAGGGCACGGCCCACTGTCGGCTGTGCCAATCCTGG
ATGAGTAGTCCTGGTGTGCATAAGAAAGCAGGATGAAGCCCTGGTAGCTCGTGTCTCTAGCAGCATTCCTCCATGGTCTCTGCTTTAGTTTCTGCCTCCAGCTTTCTGTTTTGAGTTGCTGCTCTGAC
TTCCCCTGATGGATTGAGACCTGTGATGTGAAATAAATCCTTTCTCCTCCAA

hide sequence

RefSeq Acc Id:

NM_001426443 ⟹ NP_001413372

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	13	74,517,443 - 74,538,948 (-)	NCBI

RefSeq Acc Id:

NM_001426445 ⟹ NP_001413374

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	13	74,517,443 - 74,538,948 (-)	NCBI

RefSeq Acc Id:

NM_001426446 ⟹ NP_001413375

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	13	74,517,443 - 74,538,948 (-)	NCBI


Protein RefSeqs	NP_001360967	(Get FASTA)	NCBI Sequence Viewer
	NP_001413372	(Get FASTA)	NCBI Sequence Viewer
	NP_001413374	(Get FASTA)	NCBI Sequence Viewer
	NP_001413375	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAC52303	(Get FASTA)	NCBI Sequence Viewer
	AAI18037	(Get FASTA)	NCBI Sequence Viewer
	AAI18047	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000089063.3
	ENSMUSP00000152502
	ENSMUSP00000152502.3

RefSeq Acc Id:	NP_001360967 ⟸ NM_001374038
- Peptide Label:	isoform 1

Ensembl Acc Id:

ENSMUSP00000089063 ⟸ ENSMUST00000091481

Ensembl Acc Id:

ENSMUSP00000152502 ⟸ ENSMUST00000223163

RefSeq Acc Id:	NP_001413372 ⟸ NM_001426443
- Peptide Label:	isoform 1

RefSeq Acc Id:	NP_001413375 ⟸ NM_001426446
- Peptide Label:	isoform 4
- UniProtKB:	A0A1Y7VM41 (UniProtKB/TrEMBL), Q0VFY0 (UniProtKB/TrEMBL)

Protein Domains

C2H2-type KRAB

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q0VFY0-F1-model_v2	AlphaFold	Q0VFY0	1-435	view protein structure

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000069184	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000091481.3	UniProtKB/TrEMBL
	ENSMUST00000223163	ENTREZGENE
	ENSMUST00000223163.3	UniProtKB/TrEMBL
Gene3D-CATH	6.10.140.140	UniProtKB/TrEMBL
	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	KRAB_dom_sf	UniProtKB/TrEMBL
	Krueppel-associated_box	UniProtKB/TrEMBL
	Zinc_finger	UniProtKB/TrEMBL
	Znf_C2H2/integrase_DNA-bd	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
MGD	MGI:3033356	ENTREZGENE
NCBI Gene	238722	ENTREZGENE
PANTHER	C2H2-TYPE DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
	PR DOMAIN ZINC FINGER PROTEIN	UniProtKB/TrEMBL
	TRANSCRIPTIONAL REPRESSOR PROTEIN YY	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN 143	UniProtKB/TrEMBL
Pfam	KRAB	UniProtKB/TrEMBL
	zf-C2H2	UniProtKB/TrEMBL
	zf-H2C2_2	UniProtKB/TrEMBL
PhenoGen	Zfp72	PhenoGen
PROSITE	KRAB	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	Krueppel-associated_box	UniProtKB/TrEMBL
	SSF57667	UniProtKB/TrEMBL
UniProt	A0A1Y7VM41	ENTREZGENE
	Q0VFY0	ENTREZGENE, UniProtKB/TrEMBL
	Q60916_MOUSE	UniProtKB/TrEMBL
UniProt Secondary	A0A1Y7VM41	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
		Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Send us a Message

Imported Disease Annotations - ClinVar